Parental gene:

Clns1a, ENSMUSG00000025439

Aliases:None
Description:chloride channel, nucleotide-sensitive, 1A [Source:MGI Symbol;Acc:MGI:109638]
Organism:Mouse (Mus musculus)
Coordinates:7:97696633..97718879(+)


>ENSMUSG00000025439
ATGCTTTCCCCGGCAATGAGCTTCCTCAAAAGCTTCCCGCCGCCTGGGTCGGCCGACGGGCTCCGGCTGCAGCAGCCAGA
CACCGAGGCTGTGCTGAACGGGAAGGGGCTCGGCACCGGCACGCTTTACATCGCGGAGAGCCGCCTGTCCTGGTTAGATG
GTTCGGGATTAGGATTCTCACTGGAATACCCCACCATTAGTTTACATGCGGTGTCCAGGGATCCAAACGCTTACCCTCAA
GAGCATTTGTATGTTATGGTGAATGCCAAGCTTGGAGAAGAATCAAAAGAACCTCTCTCTGATGAAGATGAGGAAGACAA
TGATGATGTTGAACCCATTTCTGAATTTCGATTTGTGCCCAGTGATAAGTCAGCATTGGAGGCGATGTTCACAGCAATGT
GTGAGTGCCAGGCCTTGCATCCAGACCCTGAGGATGAAGACTCGGACGACTATGATGGAGAGGAGTATGATGTGGAGGCA
CATGAACAAGGACAAGGGGACATCCCTACATTTTATACCTATGAAGAAGGACTATCCCATTTAACAGCGGAAGGGCAAGC
CACGTTGGAGAGATTAGAAGGGATGCTTTCTCAGTCTGTGAGCAGCCAATATAATATGGCAGGCGTCCGAACAGAAGACT
CAGTAAGAAATTATGAAGATGGCATGGAGGTGGAAACCACACCAACTGTTGCCGGACAGTTTGAGGATGCAGATGTGGAT
CACTGA

Library Parental gene expression (RPM)
SRP007412_brain 48 .06 RPM
SRP007412_cerebellum 42 .38 RPM
SRP007412_heart 19 .64 RPM
SRP007412_kidney 24 .29 RPM
SRP007412_liver 23 .35 RPM
SRP007412_testis 26 .35 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000019930 ortholog_one2one 1 retrogene
retro_btau_376,
Canis familiaris ENSCAFG00000004900 possible_ortholog 6 retrogenes
retro_cfam_1112, retro_cfam_1448, retro_cfam_255, retro_cfam_327, retro_cfam_720, retro_cfam_727,
Callithrix jacchus ENSCJAG00000014927 ortholog_one2one 1 retrogene
retro_cjac_4085,
Cavia porcellus ENSCPOG00000005260 ortholog_one2many 1 retrogene
retro_cpor_67,
Felis catus ENSFCAG00000026321 possible_ortholog 1 retrogene
retro_fcat_736,
Homo sapiens ENSG00000074201 ortholog_one2one 2 retrogenes
retro_hsap_3010, retro_hsap_3595,
Gorilla gorilla ENSGGOG00000003091 ortholog_one2one 1 retrogene
retro_ggor_2084,
Macropus eugenii ENSMEUG00000005935 ortholog_one2one 4 retrogenes
retro_meug_1825, retro_meug_2097, retro_meug_783, retro_meug_929,
Nomascus leucogenys ENSNLEG00000016699 ortholog_one2one 2 retrogenes
retro_nleu_300, retro_nleu_756,
Oryctolagus cuniculus ENSOCUG00000024393 ortholog_one2many 1 retrogene
retro_ocun_1303,
Pongo abelii ENSPPYG00000003712 ortholog_one2one 1 retrogene
retro_pabe_2494,
Sorex araneus ENSSARG00000009460 ortholog_one2one 2 retrogenes
retro_sara_247, retro_sara_682,
Ictidomys tridecemlineatus ENSSTOG00000027980 ortholog_one2one 3 retrogenes
retro_itri_239, retro_itri_319, retro_itri_490,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_1984 95.68 67.22
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Download FASTA sequences of all ENSMUSG00000025439 retrocopies