Parental gene: | ENSSTOG00000023329 |
| Aliases: | None |
| Description: | None |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393279.1:43482606..43493739(+) |
>ENSSTOG00000023329
ATGGCGGCCGGCGGCAGTGATCCACGGGCTGGTGATGTGGAAGAGGACGCCTCACAGCTTATCTTTCCCAAAGAGTTTGA
AACAGCAGAGACTCTTCTAAATTCAGAAGTTCATATGCTTCTGGAGCATCGAAAGCAACAAAATGAGAGTGCAGAGGATG
AGCAGGAACTCTCAGGAGTCTTCATGAAAACTTTAAACTACACTTCCCGTTTCAGTCATTTCAAAAATAGAGAGACCATT
GCAAGTGTCCGTAGCTTGCTGCTCCAGAAAAAGCTACATAAGTTTGAGTTGGCTTGTTTGGCCAACCTTTGCCCAGAGAC
TGCTGAAGAGTCCAAGGCTCTGATTCCAAGCCTGGAGGGGCGATTTGAAGATGAGGAACTGCAGCAGATTCTTGATGATA
TCCAGACAAAGCGCAGTTTCCAGTATTAA
ATGGCGGCCGGCGGCAGTGATCCACGGGCTGGTGATGTGGAAGAGGACGCCTCACAGCTTATCTTTCCCAAAGAGTTTGA
AACAGCAGAGACTCTTCTAAATTCAGAAGTTCATATGCTTCTGGAGCATCGAAAGCAACAAAATGAGAGTGCAGAGGATG
AGCAGGAACTCTCAGGAGTCTTCATGAAAACTTTAAACTACACTTCCCGTTTCAGTCATTTCAAAAATAGAGAGACCATT
GCAAGTGTCCGTAGCTTGCTGCTCCAGAAAAAGCTACATAAGTTTGAGTTGGCTTGTTTGGCCAACCTTTGCCCAGAGAC
TGCTGAAGAGTCCAAGGCTCTGATTCCAAGCCTGGAGGGGCGATTTGAAGATGAGGAACTGCAGCAGATTCTTGATGATA
TCCAGACAAAGCGCAGTTTCCAGTATTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000011746 | ortholog_one2many | 1 retrogene | |
| Canis familiaris | ENSCAFG00000004311 | ortholog_one2many | 2 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000013850 | ortholog_one2many | 3 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000008527 | ortholog_one2many | 1 retrogene | |
| Felis catus | ENSFCAG00000027816 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000004723 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000001989 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000018653 | ortholog_many2many | 4 retrogenes | |
| Mustela putorius furo | ENSMPUG00000016685 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000024258 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000021449 | ortholog_many2many | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000005327 | ortholog_one2many | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000012759 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000012436 | ortholog_one2many | 1 retrogene | |
| Sorex araneus | ENSSARG00000009037 | ortholog_one2many | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000014817 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_145 | 86.62 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_itri_600 | 77.89 | 66.20 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_itri_1323 | 64.58 | 66.20 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000023329 retrocopies