Parental gene: | PDHB, ENSSTOG00000019553 |
| Aliases: | None |
| Description: | pyruvate dehydrogenase (lipoamide) beta [Source:HGNC Symbol;Acc:8808] |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393283.1:2580627..2585887(+) |
>ENSSTOG00000019553
ATGGCGGCGGTATCGGGGCTGGTGCGGAGACCCCTTCAGCAGGTCTCCGGGCTGCTGAGGAGGCGCTTTCATCGGACCAC
GCCGGCCGCCCTGCAGATGACAGTTCGAGATGCTATCAATCAAGGTATGGATGAGGAACTGGAAAGAGATGAGAAGGTAT
TTCTTCTTGGGGAAGAAGTTGCCCAGTATGACGGGGCATACAAGGTTAGCCGAGGCCTGTGGAAGAAATATGGAGACAAA
AGGATTATAGATACTCCCATATCTGAGATGGGCTTTGCTGGAATTGCTGTCGGTGCAGCTATGGCTGGTTTGCGACCCAT
TTGTGAATTTATGACCTTTAATTTCTCCATGCAAGCCATTGACCAGGTTATAAATTCAGCTGCCAAGACCTACTATATGT
CAGGGGGCCTCCAGTGTGTGCCCATAGTCTTCAGGGGGCCCAATGGTGCCTCAGCAGGTGTAGCTGCCCAGCACTCACAG
TGCTTTGCTGCGTGGTATGGGCACTGCCCAGGCTTAAAGGTGGTCAGCCCCTGGAATTCAGAAGATGCGAAAGGACTCAT
CAAATCAGCCATTCGAGATAACAATCCAGTGGTGGTACTAGAGAATGAATTGATGTACGGAGTTCCTTTTGAATTTCCTA
CAGAAGCTCAATCAAAAGATTTTCTGATTCCTATCGGAAAAGCCAAAGTAGAAAGGCAAGGGACACATATAACGGTGGTT
TCCCACTCCAGACCTGTGGGCCACTGCTTAGAAGCTGCTACAGTGCTATCTAAAGAGGGAATTGAATGTGAGGTGATAAA
TATGCGTACCATCAGACCAATGGACATTGACACCATAGAAGCCAGTGTCATGAAGACAAATCATCTCATAACTGTGGAAG
GAGGCTGGCCACAATTTGGAGTAGGAGCTGAAATTTGTGCCAGGATCATGGAAGGCCCTGCATTCAATTTCCTGGATGCT
CCTGCTGTTCGAGTCACTGGTGCTGACGTCCCTATGCCTTATGCAAAGATTCTAGAAGACAACTCTGTACCTCAGGTCAA
GGACATCATATTTGCCATAAAGAAAACATTAAATATCTAG
ATGGCGGCGGTATCGGGGCTGGTGCGGAGACCCCTTCAGCAGGTCTCCGGGCTGCTGAGGAGGCGCTTTCATCGGACCAC
GCCGGCCGCCCTGCAGATGACAGTTCGAGATGCTATCAATCAAGGTATGGATGAGGAACTGGAAAGAGATGAGAAGGTAT
TTCTTCTTGGGGAAGAAGTTGCCCAGTATGACGGGGCATACAAGGTTAGCCGAGGCCTGTGGAAGAAATATGGAGACAAA
AGGATTATAGATACTCCCATATCTGAGATGGGCTTTGCTGGAATTGCTGTCGGTGCAGCTATGGCTGGTTTGCGACCCAT
TTGTGAATTTATGACCTTTAATTTCTCCATGCAAGCCATTGACCAGGTTATAAATTCAGCTGCCAAGACCTACTATATGT
CAGGGGGCCTCCAGTGTGTGCCCATAGTCTTCAGGGGGCCCAATGGTGCCTCAGCAGGTGTAGCTGCCCAGCACTCACAG
TGCTTTGCTGCGTGGTATGGGCACTGCCCAGGCTTAAAGGTGGTCAGCCCCTGGAATTCAGAAGATGCGAAAGGACTCAT
CAAATCAGCCATTCGAGATAACAATCCAGTGGTGGTACTAGAGAATGAATTGATGTACGGAGTTCCTTTTGAATTTCCTA
CAGAAGCTCAATCAAAAGATTTTCTGATTCCTATCGGAAAAGCCAAAGTAGAAAGGCAAGGGACACATATAACGGTGGTT
TCCCACTCCAGACCTGTGGGCCACTGCTTAGAAGCTGCTACAGTGCTATCTAAAGAGGGAATTGAATGTGAGGTGATAAA
TATGCGTACCATCAGACCAATGGACATTGACACCATAGAAGCCAGTGTCATGAAGACAAATCATCTCATAACTGTGGAAG
GAGGCTGGCCACAATTTGGAGTAGGAGCTGAAATTTGTGCCAGGATCATGGAAGGCCCTGCATTCAATTTCCTGGATGCT
CCTGCTGTTCGAGTCACTGGTGCTGACGTCCCTATGCCTTATGCAAAGATTCTAGAAGACAACTCTGTACCTCAGGTCAA
GGACATCATATTTGCCATAAAGAAAACATTAAATATCTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000021724 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000007340 | ortholog_one2many | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000019739 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000006937 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000002398 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000021748 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000015632 | ortholog_one2many | 1 retrogene | |
| Procavia capensis | ENSPCAG00000016595 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000008480 | ortholog_one2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000016148 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_249 | 65.52 | 78.83 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_itri_1349 | 75.68 | 61.28 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000019553 retrocopies