Parental gene:

PDHB, ENSDNOG00000006937

Aliases:None
Description:pyruvate dehydrogenase (lipoamide) beta [Source:HGNC Symbol;Acc:8808]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_5004:140643..145606(-)


>ENSDNOG00000006937
ATGGCGGCGGCGTCTGGGCTGGTGCGGAGACCCCTTCAGCAGGTGTCCGGGCTGTTGCGGAGGCGCTTCCATCGGTCGGC
GCCGGCGGCGTTGCAGGTGACAGTTCGTGATGCTATAAATCAAGGAATGGATGAGGAGCTGGAAAGAGATGAGAAGGTAT
TTCTGCTTGGGGAGGAAGTTGCCCAGTATGATGGGGCATACAAGGTTAGTCGAGGCCTATGGAAGAAATATGGAGACAAG
AGGATCATAGATACCCCCATATCAGAGATGGGCTTTACTGGAATTGCTGTAGGTGCAGCTATGGCTGGCTTGCGGCCCAT
TTGTGAATTTATGACCTTCAATTTCTCCATGCAAGCCATTGACCAGGTTATAAACTCAGCTGCCAAGACTTACTACATGT
CAGCTGGCCTTCAGAGCGTGCCCATAGTCTTCAGGGGGCCCAATGGTTCCTCAGCAGGTGTGGCTGCCCAGCATTCGCAG
TGCTTTGCTGCCTGGTACGGGCACTGCCCAGGCTTAAAGGTTGTCAGCCCCTGGAATTCAGAGGATGCAAAAGGACTTAT
TAAATCAGCCATTCGGGATGACAATCCAGTCGTGATGCTAGAGAATGAATTGATGTATGGAGTTCCTTTTGAATTTCCTG
ATGAAGCTCAGTCAAAAGATTTTCTGGTTCCTATTGGAAAAGCCAAAATTGAGAGACAAGGGACGCATATAACCGTGGTT
TCCCATTCAAGGCCTGTTGGTCACTGCTTAGAAGCTGCAACGGTGCTTTCTAAAGAGGGAGTTGAATGTGAGGTGATAAA
CCTGCGTACCATCAGACCAATGGACATTGAAACCATAGAAGCCAGTGTCATGAAGACAAATCATCTCGTAACTGTGGAAG
GAGGCTGGCCACAGTTTGGAGTAGGAGCTGAAATTTGTGCCAGGATCATGGAAGGCCCTGCATTCAACTTCCTGGATGCT
CCTGCAGTTCGTGTCACTGGTGCTGACATCCCTATGCCTTATGCAAAGATTCTAGAAGACAACTCTGTACCTCAGGTCAA
AGATATCATATTTGCCATCAAGAAAACATTAAATATCTAG

Library Parental gene expression (RPM)
SRP012922_ascending_colon 155 .96 RPM
SRP012922_cerebellum 134 .17 RPM
SRP012922_heart 220 .66 RPM
SRP012922_kidney 159 .90 RPM
SRP012922_liver 61 .92 RPM
SRP012922_lung 56 .66 RPM
SRP012922_quadricep_muscle 228 .99 RPM
SRP012922_spleen 62 .61 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000021724 ortholog_one2one 1 retrogene
retro_btau_596,
Canis familiaris ENSCAFG00000007340 ortholog_one2many 2 retrogenes
retro_cfam_1215, retro_cfam_2031,
Callithrix jacchus ENSCJAG00000019739 ortholog_one2one 1 retrogene
retro_cjac_3875,
Monodelphis domestica ENSMODG00000002398 ortholog_one2one 1 retrogene
retro_mdom_614,
Mus musculus ENSMUSG00000021748 ortholog_one2one 1 retrogene
retro_mmus_290,
Oryctolagus cuniculus ENSOCUG00000015632 ortholog_one2many 1 retrogene
retro_ocun_342,
Procavia capensis ENSPCAG00000016595 ortholog_one2one 1 retrogene
retro_pcap_261,
Sarcophilus harrisii ENSSHAG00000008480 ortholog_one2many 1 retrogene
retro_shar_5,
Ictidomys tridecemlineatus ENSSTOG00000019553 ortholog_one2one 2 retrogenes
retro_itri_1349, retro_itri_249,
Tupaia belangeri ENSTBEG00000016148 ortholog_one2one 2 retrogenes
retro_tbel_1651, retro_tbel_3170,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_1090 66.14 52.09
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSDNOG00000006937 retrocopies