Parental gene: | SRP14, ENSSTOG00000015627 |
| Aliases: | None |
| Description: | signal recognition particle 14kDa (homologous Alu RNA binding protein) [Source:HGNC Symbol;Acc:11299] |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393281.1:3527922..3530815(-) |
>ENSSTOG00000015627
ATGGTGCTCCTGGAGAGCGAGCAGTTCCTGACGGAGCTCACCAGGCTCTTCCAGAAGTGTCGGTTGTCGGGCAGCGTGTA
CATCACCTTGAAGAAGTATGATGGTCGAACTAAACCCACACCGAGGAAGGGTTCTGTGGAGGGCGTTGAGCCCTCAGACA
ACAAGTGTCTGTTGAGAGCAACGGATGGCAAAAAGAAGATCAGCACAGTGGTGAGCTCCAAAGAAGTGAATAAATTTCAG
ATGGCTTATTCAAACCTATTGAGAGCTAACATGGATGGGCTGAAGAAGAGAGACAAAAAGAGCAAGAGTAAGAAGAGCAA
AGCAGCACAG
ATGGTGCTCCTGGAGAGCGAGCAGTTCCTGACGGAGCTCACCAGGCTCTTCCAGAAGTGTCGGTTGTCGGGCAGCGTGTA
CATCACCTTGAAGAAGTATGATGGTCGAACTAAACCCACACCGAGGAAGGGTTCTGTGGAGGGCGTTGAGCCCTCAGACA
ACAAGTGTCTGTTGAGAGCAACGGATGGCAAAAAGAAGATCAGCACAGTGGTGAGCTCCAAAGAAGTGAATAAATTTCAG
ATGGCTTATTCAAACCTATTGAGAGCTAACATGGATGGGCTGAAGAAGAGAGACAAAAAGAGCAAGAGTAAGAAGAGCAA
AGCAGCACAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000029889 | ortholog_one2many | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000020912 | possible_ortholog | 3 retrogenes | |
| Equus caballus | ENSECAG00000000319 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000011870 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000030207 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000009921 | possible_ortholog | 1 retrogene | |
| Microcebus murinus | ENSMICG00000007637 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000016061 | possible_ortholog | 4 retrogenes | |
| Monodelphis domestica | ENSMODG00000029204 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000008324 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000029070 | possible_ortholog | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000006342 | possible_ortholog | 3 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000002186 | ortholog_one2one | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000000036 | ortholog_one2one | 5 retrogenes | |
| Vicugna pacos | ENSVPAG00000010282 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_382 | 67.11 | 67.27 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_itri_432 | 67.57 | 99.09 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_itri_707 | 69.74 | 67.27 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_itri_710 | 80.70 | 50.91 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_itri_799 | 59.72 | 64.55 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_itri_824 | 83.15 | 79.09 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_itri_1334 | 92.86 | 63.64 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_itri_1501 | 97.00 | 90.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_itri_1633 | 96.47 | 76.36 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000015627 retrocopies