Parental gene:

ENSSTOG00000012843

Aliases:None
Description:None
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393411.1:5415878..5434730(+)


>ENSSTOG00000012843
GGTATCCGTTACAGCACTGATGTGAGTGTAGATGAAGTAAAAGCGTTGGCTTCTCTGATGACTTATAAGTGTGCAGTGGT
TGATGTGCCATTTGGTGGTGCTAAAGCAGGTGTTAAGATCAATCCCAAGAACTATACAGATAATGAATTGGAAAAGATCA
CAAGAAGGTTCACTATGGAGCTCGCAAAAAAAGGTTTTATTGGTCCTGGTATTGATGTGCCTGCCCCAGACATGAGCACG
GGTGAGCGAGAGATGTCCTGGATCGCTGACACCTATGCCAGCACCATAGGGCACTATGATATTAATGCACATGCCTGTGT
TACTGGTAAACCCATCAGTCAAGGAGGCATCCATGGACGCATTTCTGCTACTGGCCGTGGTGTTTTCCATGGAATTGAAA
ACTTCATCAATGAAGCTTCTTACATGAGCATTTTAGGAATGACACCAGGATTTGGAGATAAAACATTTGTGGTTCAGGGT
TTTGGTAACGTGGGTCTGCACTCTATGAGGTATTTACATCGTTTTGGTGCTAAATGTGTTGGTGTTGGTGAATCTGATGG
GAGTATATGGAATCCAGATGGTATTGACCCAAAGGAACTAGAAGATTTCAAACTGCAACATGGATCAATTCTGGGCTTCC
CCAAAGCAAAGGTCTATGAAGGAAGCATCTTGGAGGCTGACTGTGACATACTGATCCCTGCTGCTAGTGAGAAGCAGTTG
ACCAAATCCAATGCACCCAGAGTGAAAGCCAAGATCATTGCTGAAGGTGCCAATGGACCAACCACTCCAGAAGCTGATAA
GATTTTCCTGGAGAGGAACATCATGGTTATTCCAGATCTCTACTTAAATGCTGGCGGAGTGACAGTATCTTACTTTGAGT
GGCTGAAGAATCTGAATCATGTCAGCTATGGCCGATTAACCTTCAAATATGAAAGGGATTCTAACTACCACTTGCTCATG
TCTGTTCAAGAGAGCTTAGAAAGAAAATTTGGAAAGCATGGCGGAACAATTCCTATTGTACCCACCGCAGAGTTCCAGGA
CAGGATATCGGGTGCATCAGAGAAAGACATTGTGCATTCTGGCTTAGCCTACACCATGGAGCGTTCAGCCAGGCAAATTA
TGCGTACAGCCATGAAATATAACCTGGGCTTGGACCTGAGAACAGCTGCCTATGTCAATGCCATTGAGAAAGTCTTCAAA
GTATACAATGAAGCTGGTGTGACCTTCACATAA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000007540 ortholog_one2one 2 retrogenes
retro_btau_1413, retro_btau_1741,
Canis familiaris ENSCAFG00000016095 ortholog_one2many 1 retrogene
retro_cfam_747,
Choloepus hoffmanni ENSCHOG00000001101 possible_ortholog 1 retrogene
retro_chof_2002,
Callithrix jacchus ENSCJAG00000011633 ortholog_one2one 1 retrogene
retro_cjac_2830,
Dipodomys ordii ENSDORG00000009767 ortholog_one2one 1 retrogene
retro_dord_400,
Equus caballus ENSECAG00000007371 ortholog_one2one 2 retrogenes
retro_ecab_886, retro_ecab_919,
Echinops telfairi ENSETEG00000019638 ortholog_one2one 2 retrogenes
retro_etel_141, retro_etel_2024,
Homo sapiens ENSG00000148672 ortholog_one2many 1 retrogene
retro_hsap_31,
Gorilla gorilla ENSGGOG00000015770 ortholog_one2one 1 retrogene
retro_ggor_2954,
Loxodonta africana ENSLAFG00000012059 ortholog_one2one 1 retrogene
retro_lafr_504,
Microcebus murinus ENSMICG00000016526 ortholog_one2one 1 retrogene
retro_mmur_524,
Monodelphis domestica ENSMODG00000002756 ortholog_one2many 1 retrogene
retro_mdom_124,
Nomascus leucogenys ENSNLEG00000011658 ortholog_one2many 1 retrogene
retro_nleu_36,
Otolemur garnettii ENSOGAG00000003641 ortholog_one2one 1 retrogene
retro_ogar_2757,
Procavia capensis ENSPCAG00000008662 ortholog_one2many 1 retrogene
retro_pcap_11,
Pongo abelii ENSPPYG00000002827 ortholog_one2many 3 retrogenes
retro_pabe_3109, retro_pabe_3213, retro_pabe_79,
Pan troglodytes ENSPTRG00000002711 ortholog_one2one 4 retrogenes
retro_ptro_3162, retro_ptro_3283, retro_ptro_3285, retro_ptro_3290,
Tarsius syrichta ENSTSYG00000001578 ortholog_one2one 1 retrogene
retro_tsyr_313,
Tursiops truncatus ENSTTRG00000008145 ortholog_one2one 1 retrogene
retro_ttru_950,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_737 80.39 87.56
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Download FASTA sequences of all ENSSTOG00000012843 retrocopies