Parental gene: | GLUD1, ENSBTAG00000007540 |
| Aliases: | GLUD1, GDH |
| Description: | Glutamate dehydrogenase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P00366] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 28:41941041..41979591(-) |
>ENSBTAG00000007540
ATGTACCGATGCCTGGGTGAAGCGCTGCTGCTGTCCCGCATCGGGCCCGCCGCCCTGGGTTCCGTGGCTGCCGACTCGGC
CGTGCTGCTGGGCCGGGCCCGCGGGCAGGCTGCCGCAGCCGTCGCCGCCCCGCAGCCGGGGCTTGTGCCACCCGCTCGGC
GACACTACAGCGAGGCGGCGGCCGACCGCGAGGACGACCCCAACTTCTTCAAGATGGTGGAGGGCTTCTTTGACCGCGGT
GCCAGCATCGTGGAGGACAAGCTGGTGGAGGACCTCAAGACCCGGGAGACCGAGGAGCAGAAGCGGAACCGGGTGCGTGG
CATCCTGCGGATCATCAAGCCCTGCAACCATGTGCTGAGCCTGTCCTTCCCCATCCGGCGCGACGACGGCTCCTGGGAAG
TCATCGAGGGCTACCGGGCCCAGCACAGCCAGCACCGCACGCCCTGCAAGGGAGGTATCCGTTACAGCACTGATGTGAGT
GTAGATGAAGTAAAAGCTCTGGCTTCTCTGATGACATATAAGTGTGCAGTGGTTGATGTGCCATTTGGGGGTGCCAAAGC
TGGTGTGAAGATCAATCCCAAGAACTACACTGATAATGAATTGGAAAAGATCACAAGGAGGTTCACCATGGAGCTGGCCA
AGAAGGGCTTTATTGGCCCTGGCGTCGATGTGCCCGCCCCCGACATGAGCACCGGCGAGCGGGAGATGTCCTGGATCGCC
GACACCTACGCCAGCACCATAGGACACTATGATATTAATGCCCACGCCTGTGTTACTGGTAAGCCCATCAGTCAGGGTGG
AATCCACGGACGGATCTCTGCTACCGGCCGGGGAGTGTTCCATGGGATTGAAAACTTCATCAATGAGGCTTCTTACATGA
GTATTTTAGGAATGACACCAGGATTTGGAGACAAAACATTTGCGGTTCAGGGATTTGGTAATGTGGGCCTGCACTCTATG
AGATATTTACATCGTTTTGGTGCTAAATGTGTTGCTGTTGGTGAGTCTGATGGCAGCATATGGAATCCAGATGGTATTGA
CCCAAAGGAACTGGAAGACTTCAAATTGCAACATGGAACAATCCTGGGCTTTCCCAAAGCAAAGATCTATGAAGGGAGCA
TCTTGGAGGTTGACTGTGACATACTAATCCCTGCTGCCAGCGAGAAGCAGCTGACCAAGTCCAATGCACCAAGAGTCAAA
GCCAAGATCATTGCTGAAGGTGCCAACGGACCGACAACTCCAGAAGCTGATAAGATTTTCCTAGAGAGGAACATTATGGT
TATTCCAGATCTCTACCTGAATGCTGGAGGAGTGACAGTGTCTTACTTTGAGTGGCTGAAGAATCTAAATCATGTCAGCT
ACGGTCGTTTGACCTTCAAATATGAAAGGGATTCTAACTACCACTTGCTTATGTCTGTTCAAGAGAGTTTGGAAAGGAAA
TTTGGAAAACATGGTGGAACTATTCCCATTGTACCCACAGCAGAGTTCCAAGACAGGATATCGGGTGCCTCTGAGAAAGA
CATCGTGCACTCTGGTTTAGCTTACACCATGGAGCGCTCTGCCAGGCAAATCATGCGCACGGCCATGAAGTATAACCTGG
GGCTGGACCTGAGAACGGCCGCCTACGTCAACGCCATCGAGAAGGTCTTCAGGGTGTACAACGAGGCTGGCGTGACCTTC
ACATAG
ATGTACCGATGCCTGGGTGAAGCGCTGCTGCTGTCCCGCATCGGGCCCGCCGCCCTGGGTTCCGTGGCTGCCGACTCGGC
CGTGCTGCTGGGCCGGGCCCGCGGGCAGGCTGCCGCAGCCGTCGCCGCCCCGCAGCCGGGGCTTGTGCCACCCGCTCGGC
GACACTACAGCGAGGCGGCGGCCGACCGCGAGGACGACCCCAACTTCTTCAAGATGGTGGAGGGCTTCTTTGACCGCGGT
GCCAGCATCGTGGAGGACAAGCTGGTGGAGGACCTCAAGACCCGGGAGACCGAGGAGCAGAAGCGGAACCGGGTGCGTGG
CATCCTGCGGATCATCAAGCCCTGCAACCATGTGCTGAGCCTGTCCTTCCCCATCCGGCGCGACGACGGCTCCTGGGAAG
TCATCGAGGGCTACCGGGCCCAGCACAGCCAGCACCGCACGCCCTGCAAGGGAGGTATCCGTTACAGCACTGATGTGAGT
GTAGATGAAGTAAAAGCTCTGGCTTCTCTGATGACATATAAGTGTGCAGTGGTTGATGTGCCATTTGGGGGTGCCAAAGC
TGGTGTGAAGATCAATCCCAAGAACTACACTGATAATGAATTGGAAAAGATCACAAGGAGGTTCACCATGGAGCTGGCCA
AGAAGGGCTTTATTGGCCCTGGCGTCGATGTGCCCGCCCCCGACATGAGCACCGGCGAGCGGGAGATGTCCTGGATCGCC
GACACCTACGCCAGCACCATAGGACACTATGATATTAATGCCCACGCCTGTGTTACTGGTAAGCCCATCAGTCAGGGTGG
AATCCACGGACGGATCTCTGCTACCGGCCGGGGAGTGTTCCATGGGATTGAAAACTTCATCAATGAGGCTTCTTACATGA
GTATTTTAGGAATGACACCAGGATTTGGAGACAAAACATTTGCGGTTCAGGGATTTGGTAATGTGGGCCTGCACTCTATG
AGATATTTACATCGTTTTGGTGCTAAATGTGTTGCTGTTGGTGAGTCTGATGGCAGCATATGGAATCCAGATGGTATTGA
CCCAAAGGAACTGGAAGACTTCAAATTGCAACATGGAACAATCCTGGGCTTTCCCAAAGCAAAGATCTATGAAGGGAGCA
TCTTGGAGGTTGACTGTGACATACTAATCCCTGCTGCCAGCGAGAAGCAGCTGACCAAGTCCAATGCACCAAGAGTCAAA
GCCAAGATCATTGCTGAAGGTGCCAACGGACCGACAACTCCAGAAGCTGATAAGATTTTCCTAGAGAGGAACATTATGGT
TATTCCAGATCTCTACCTGAATGCTGGAGGAGTGACAGTGTCTTACTTTGAGTGGCTGAAGAATCTAAATCATGTCAGCT
ACGGTCGTTTGACCTTCAAATATGAAAGGGATTCTAACTACCACTTGCTTATGTCTGTTCAAGAGAGTTTGGAAAGGAAA
TTTGGAAAACATGGTGGAACTATTCCCATTGTACCCACAGCAGAGTTCCAAGACAGGATATCGGGTGCCTCTGAGAAAGA
CATCGTGCACTCTGGTTTAGCTTACACCATGGAGCGCTCTGCCAGGCAAATCATGCGCACGGCCATGAAGTATAACCTGG
GGCTGGACCTGAGAACGGCCGCCTACGTCAACGCCATCGAGAAGGTCTTCAGGGTGTACAACGAGGCTGGCGTGACCTTC
ACATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 299 .47 RPM |
| SRP017611_kidney | 649 .08 RPM |
| SRP017611_liver | 571 .37 RPM |
| ERP005899_muscle | 304 .01 RPM |
| ERP005899_liver | 587 .87 RPM |
| SRP030211_testis | 28 .05 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000016095 | ortholog_one2many | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000001101 | possible_ortholog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000011633 | ortholog_one2one | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000009767 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000007371 | ortholog_one2one | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000019638 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000148672 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000015770 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000012059 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000016526 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000002756 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000011658 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000003641 | ortholog_one2one | 1 retrogene | |
| Procavia capensis | ENSPCAG00000008662 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000002827 | ortholog_one2many | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000002711 | ortholog_one2one | 4 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000012843 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000001578 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000008145 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_1413 | 67.08 | 55.97 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_btau_1741 | 81.89 | 93.94 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000007540 retrocopies