Parental gene: | SF1, ENSSTOG00000009790 |
| Aliases: | None |
| Description: | splicing factor 1 [Source:HGNC Symbol;Acc:12950] |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393409.1:4533789..4546078(+) |
>ENSSTOG00000009790
CCTTTAGACTTCCCAAGTAAGAAGCGGAAACGGAGCAGATGGAATCAAGATACAATGGAACAGAAGACAGTGATTCCAGG
AATGCCTACTGTTATTCCCCCTGGACTTACTCGGGAACAAGAGAGAGCTTACATAGTGCAACTGCAGATAGAAGACCTGA
CTCGTAAACTGCGCACAGGAGACCTGGGCATCCCCCCTAACCCTGAGGACAGGTCCCCTTCCCCTGAGCCCATCTACAAT
AGTGAGGGGAAGCGACTTAACACCAGAGAGTTCCGTACACGCAAAAAGCTGGAAGAGGAGCGGCACAACCTCATCACGGA
GATGGTTGCCCTCAACCCTGATTTCAAGCCACCTGCAGATTATAAACCTCCAGCAACACGTGTGAGTGATAAAGTAATGA
TCCCTCAAGATGAGTATCCAGAAATCAACTTTGTTGGGCTACTAATTGGGCCCAGAGGGAACACCCTGAAGAATATTGAG
AAGGAGTGCAACGCCAAGATCATGATCCGGGGGAAAGGGTCTGTGAAAGAAGGGAAGGTTGGACGCAAAGATGGCCAGAT
GTTGCCAGGGGAAGATGAGCCACTTCATGCCCTAGTCACTGCTAATACAATGGAGAATGTTAAAAAGGCAGTAGAGCAGA
TCAGAAACATCCTGAAGCAAGGTATTGAGACCCCAGAGGACCAGAATGATCTACGGAAGATGCAGCTTCGAGAATTGGCT
CGCTTGAATGGTACCCTTCGGGAAGATGATAACAGAATCTTAAGACCCTGGCAGAGCTCAGAGACCCGCAGCATTACCAA
TACTACAGTGTGTACCAAGTGTGGAGGAGCTGGCCACATTGCTTCAGATTGCAAGTTTCAAAGGCCTGGTGACCCCCAGT
CAGCTCAGGATAAAGCACGGATGGATAAAGAATATTTGTCCTTGATGGCTGAACTTGGGGAAGCCCCTGTCCCAGCATCT
GTGGGCTCCACCTCTGGGCCTGCGACCACACCCTTGGCTAGTGCACCTCGGCCTGCTGCTCCTGCCAACAACCCGCCTCC
ACCGTCTCTCATGTCCACCACCCAGAGCCGCCCACCCTGGATGAATTCTGGCCCTTCAGAGAGTCGGCCTTATCATGGCA
TGCATGGAGGTGGTCCTGGCGGGCCTGGAGGTGGCCCCCACAGCTTCCCACACCCATTACCCAGCCTGACAGGTGGGCAT
GGTGGACATCCCATGCAGCACAACCCAAATGGACCCCCACCCCCTTGGATGCAGCCACCGCCACCACCGATGAACCAGGG
CCCCCACCCACCTGGGCACCATGGCCCTCCTCCAATGGATCAGTACCTGGGAAGTACGCCTGTGGGCTCTGGGGTCTATC
GCCTGCATCAAGGAAAAGGTATGATGCCGCCTCCGCCTATGGGCATGATGCCGCCACCGCCGCCGCCTCCCAGTGGGCAG
CCCCCGCCCCCTCCCTCTGGTCCTCTTCCCCCATGGCAGCAGCAGCAGCAGCAGCCTCCGCCACCCCCTCCGCCCAGCAG
CAGTATGGCTTCCAGTACCCCCTTGCCATGGCAGCAAAATACGACGACTACCACCACGAGCGCTGGCACAGGGTCCATCC
CGCCATGGCAACAGCAGCAGGCGGCTGCCGCAGCTTCTCCAGGAGCCCCTCAGATGCAAGGCAACCCCACTATGGTGCCC
CTGCCCCCCGGGGTCCAGCCGCCTCTGCCGCCCGGGGCCCCTCCCCCTCCGCCCCGTAGCATCGAGTGTCTTCTTTGTCT
TCTTTCTTCACCCAACTCCCTTTGCCTCTCCCCAAACCGGGCCGCCAGGATCCCTCCCCGCAGCAGCGATGGCCCGAGCC
ATGAGAGTGAGGACTTTCCGCGCCCATTGGTGACCCTTCCAGGCAGACAGCCTCAGCAGCGCCCCTGGTGGACAGGATGG
TTCGGCAAAGCAGCC
CCTTTAGACTTCCCAAGTAAGAAGCGGAAACGGAGCAGATGGAATCAAGATACAATGGAACAGAAGACAGTGATTCCAGG
AATGCCTACTGTTATTCCCCCTGGACTTACTCGGGAACAAGAGAGAGCTTACATAGTGCAACTGCAGATAGAAGACCTGA
CTCGTAAACTGCGCACAGGAGACCTGGGCATCCCCCCTAACCCTGAGGACAGGTCCCCTTCCCCTGAGCCCATCTACAAT
AGTGAGGGGAAGCGACTTAACACCAGAGAGTTCCGTACACGCAAAAAGCTGGAAGAGGAGCGGCACAACCTCATCACGGA
GATGGTTGCCCTCAACCCTGATTTCAAGCCACCTGCAGATTATAAACCTCCAGCAACACGTGTGAGTGATAAAGTAATGA
TCCCTCAAGATGAGTATCCAGAAATCAACTTTGTTGGGCTACTAATTGGGCCCAGAGGGAACACCCTGAAGAATATTGAG
AAGGAGTGCAACGCCAAGATCATGATCCGGGGGAAAGGGTCTGTGAAAGAAGGGAAGGTTGGACGCAAAGATGGCCAGAT
GTTGCCAGGGGAAGATGAGCCACTTCATGCCCTAGTCACTGCTAATACAATGGAGAATGTTAAAAAGGCAGTAGAGCAGA
TCAGAAACATCCTGAAGCAAGGTATTGAGACCCCAGAGGACCAGAATGATCTACGGAAGATGCAGCTTCGAGAATTGGCT
CGCTTGAATGGTACCCTTCGGGAAGATGATAACAGAATCTTAAGACCCTGGCAGAGCTCAGAGACCCGCAGCATTACCAA
TACTACAGTGTGTACCAAGTGTGGAGGAGCTGGCCACATTGCTTCAGATTGCAAGTTTCAAAGGCCTGGTGACCCCCAGT
CAGCTCAGGATAAAGCACGGATGGATAAAGAATATTTGTCCTTGATGGCTGAACTTGGGGAAGCCCCTGTCCCAGCATCT
GTGGGCTCCACCTCTGGGCCTGCGACCACACCCTTGGCTAGTGCACCTCGGCCTGCTGCTCCTGCCAACAACCCGCCTCC
ACCGTCTCTCATGTCCACCACCCAGAGCCGCCCACCCTGGATGAATTCTGGCCCTTCAGAGAGTCGGCCTTATCATGGCA
TGCATGGAGGTGGTCCTGGCGGGCCTGGAGGTGGCCCCCACAGCTTCCCACACCCATTACCCAGCCTGACAGGTGGGCAT
GGTGGACATCCCATGCAGCACAACCCAAATGGACCCCCACCCCCTTGGATGCAGCCACCGCCACCACCGATGAACCAGGG
CCCCCACCCACCTGGGCACCATGGCCCTCCTCCAATGGATCAGTACCTGGGAAGTACGCCTGTGGGCTCTGGGGTCTATC
GCCTGCATCAAGGAAAAGGTATGATGCCGCCTCCGCCTATGGGCATGATGCCGCCACCGCCGCCGCCTCCCAGTGGGCAG
CCCCCGCCCCCTCCCTCTGGTCCTCTTCCCCCATGGCAGCAGCAGCAGCAGCAGCCTCCGCCACCCCCTCCGCCCAGCAG
CAGTATGGCTTCCAGTACCCCCTTGCCATGGCAGCAAAATACGACGACTACCACCACGAGCGCTGGCACAGGGTCCATCC
CGCCATGGCAACAGCAGCAGGCGGCTGCCGCAGCTTCTCCAGGAGCCCCTCAGATGCAAGGCAACCCCACTATGGTGCCC
CTGCCCCCCGGGGTCCAGCCGCCTCTGCCGCCCGGGGCCCCTCCCCCTCCGCCCCGTAGCATCGAGTGTCTTCTTTGTCT
TCTTTCTTCACCCAACTCCCTTTGCCTCTCCCCAAACCGGGCCGCCAGGATCCCTCCCCGCAGCAGCGATGGCCCGAGCC
ATGAGAGTGAGGACTTTCCGCGCCCATTGGTGACCCTTCCAGGCAGACAGCCTCAGCAGCGCCCCTGGTGGACAGGATGG
TTCGGCAAAGCAGCC
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000017828 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000014239 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000002780 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_698 | 90.04 | 71.32 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000009790 retrocopies