Parental gene: | GPN1, ENSSTOG00000006379 |
| Aliases: | None |
| Description: | GPN-loop GTPase 1 [Source:HGNC Symbol;Acc:17030] |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393303.1:4972601..4992510(-) |
>ENSSTOG00000006379
CAGCGTCTCTATGGTGGGGTGGGCGGGGCCAGGGGAAAGATGGCGGCGCCCGTGGCAGCGGCGGATTCCGGGACTTCGGG
AACTCCTAATCTCCCTGTGTGTCTGTTGGTGCTGGGAATGGCAGGTTCCGGAAAAACCACTTTTGTACAGAGGCTTACGG
GACACCTGCATAGGCAAAGCTGTCCACCTTACGTGATCAACTTGGACCCAGCTGTACACGAAGTCCCCTTTCCTGCCAAT
ATTGATATTCGTGACACTGTGAAGTATAAAGAAGTCATGAAACAATATGGCCTTGGGCCCAACGGTGGCATAGTGACCTC
TCTCAATCTCTTTGCTACCAGATTTGATCAGGTGATGAAATTTATTGAGAAGGCCCAGAACACATCTAAATATGTCTTGA
TTGACACACCTGGGCAGATTGAGGTATTCACCTGGTCAGCTTCTGGGACAATCATCACCGAGGCCCTGGCATCCTCATTC
CCAACAGTTGTCATCTATGTAATGGACACATCGAGAAGTACTAACCCAGTGACGTTTATGTCGAATATGCTGTATGCCTG
CAGCATCTTGTACAAAACCAAGCTGCCTTTCATTGTGGTTATGAACAAAACTGACATCATTGATCACAGCTTTGCAGTGG
AATGGATGCAGGATTTTGAGGCTTTCCAAGATGCCTTGAATCAAGAAACTACATATGTCAGTAACCTGACCCGTTCAATG
AGCCTGGTGTTAGATGAGTTTTACAGCTCACTCAGGGTGGTGGGTGTCTCTGCTGTTGTGGGCACTGGCTTCGATGAACT
CTTTGTGCAAATCACCAGTGCTGCAGAAGAATATGAAAGGGAGTATCGTCCTGAATATGAACGTCTGAAGAAATCGTTGG
CCAGTGCACAGAGTGAACAGCAGAAAGAACAACTGGACCGCCTTCGGAAAGATATGGGCTCTGTAGCCTTGGACACAGGG
ACTGCCAAAGAGAGCGGATCTCCTGTTTTGGACCCCTCTGATTTAATCCTGACTCGAGGAACCTTGGATGAAGAGGATGA
GGAAGCTGACAGTGATACTGATGACATTGACCACAGAGTTACAGAGGAAAGTCACGAAGAGCCAGCATTTCAGAATTTTA
TGCAAGAATCAATGGCACAGTACTGGAAGAGAAACAACAAATAG
CAGCGTCTCTATGGTGGGGTGGGCGGGGCCAGGGGAAAGATGGCGGCGCCCGTGGCAGCGGCGGATTCCGGGACTTCGGG
AACTCCTAATCTCCCTGTGTGTCTGTTGGTGCTGGGAATGGCAGGTTCCGGAAAAACCACTTTTGTACAGAGGCTTACGG
GACACCTGCATAGGCAAAGCTGTCCACCTTACGTGATCAACTTGGACCCAGCTGTACACGAAGTCCCCTTTCCTGCCAAT
ATTGATATTCGTGACACTGTGAAGTATAAAGAAGTCATGAAACAATATGGCCTTGGGCCCAACGGTGGCATAGTGACCTC
TCTCAATCTCTTTGCTACCAGATTTGATCAGGTGATGAAATTTATTGAGAAGGCCCAGAACACATCTAAATATGTCTTGA
TTGACACACCTGGGCAGATTGAGGTATTCACCTGGTCAGCTTCTGGGACAATCATCACCGAGGCCCTGGCATCCTCATTC
CCAACAGTTGTCATCTATGTAATGGACACATCGAGAAGTACTAACCCAGTGACGTTTATGTCGAATATGCTGTATGCCTG
CAGCATCTTGTACAAAACCAAGCTGCCTTTCATTGTGGTTATGAACAAAACTGACATCATTGATCACAGCTTTGCAGTGG
AATGGATGCAGGATTTTGAGGCTTTCCAAGATGCCTTGAATCAAGAAACTACATATGTCAGTAACCTGACCCGTTCAATG
AGCCTGGTGTTAGATGAGTTTTACAGCTCACTCAGGGTGGTGGGTGTCTCTGCTGTTGTGGGCACTGGCTTCGATGAACT
CTTTGTGCAAATCACCAGTGCTGCAGAAGAATATGAAAGGGAGTATCGTCCTGAATATGAACGTCTGAAGAAATCGTTGG
CCAGTGCACAGAGTGAACAGCAGAAAGAACAACTGGACCGCCTTCGGAAAGATATGGGCTCTGTAGCCTTGGACACAGGG
ACTGCCAAAGAGAGCGGATCTCCTGTTTTGGACCCCTCTGATTTAATCCTGACTCGAGGAACCTTGGATGAAGAGGATGA
GGAAGCTGACAGTGATACTGATGACATTGACCACAGAGTTACAGAGGAAAGTCACGAAGAGCCAGCATTTCAGAATTTTA
TGCAAGAATCAATGGCACAGTACTGGAAGAGAAACAACAAATAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Erinaceus europaeus | ENSEEUG00000013421 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000014941 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000007425 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_1428 | 65.32 | 63.31 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_itri_1718 | 91.60 | 97.67 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000006379 retrocopies