Parental gene:

GALNT1, ENSSTOG00000003311

Aliases:None
Description:UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1) [Source:HGNC Symbol;Acc:4123]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393327.1:9446814..9530898(-)


>ENSSTOG00000003311
ATGATTGCACTCAACAGATCTTTACCAGATGTTAGATTAGAAGGGTGTAAAACAAAGGTGTATCCAGATAATCTTCCTAC
AACAAGTGTCGTGATTGTTTTCCATAATGAGGCTTGGAGCACACTTCTTCGAACTGTCCATAGTGTCATTAATCGCTCAC
CAAGACACATGATAGAAGAAATTGTTCTAGTAGATGATGCCAGTGAAAGAGACTTTTTGAAAAGACCTCTAGAGAGTTAT
GTGAAGAAACTCAAAGTGCCAGTTCATGTAATTCGAATGGAACAGCGTTCTGGATTGATCAGAGCTAGATTGAAAGGAGC
TGCAGTGTCCAAAGGCCAGGTGATCACCTTCTTAGATGCTCATTGTGAGTGCACAGTGGGATGGCTGGAGCCTCTCTTAG
CAAGGATCAAACATGACAGGAGAACAGTGGTATGTCCTATCATTGATGTGATCAGTGATGACACTTTTGAGTACATGGCA
GGCTCTGATATGACTTATGGTGGATTCAACTGGAAGCTTAATTTTCGCTGGTATCCTGTTCCCCAGAGAGAAATGGACAG
AAGGAAAGGTGATAGGACTCTTCCTGTCAGAACACCTACAATGGCAGGAGGCCTTTTTTCAATAGACAGAGATTACTTTC
AGGAAATTGGAACATATGATGCTGGAATGGATATTTGGGGAGGAGAAAACTTAGAAATTTCCTTTAGGATTTGGCAGTGT
GGAGGAACTTTGGAAATTGTCACTTGCTCACATGTTGGACATGTGTTTCGGAAGGCTACCCCATACACATTTCCAGGAGG
CACAGGGCAAATTATCAATAAAAATAACAGACGACTTGCAGAAGTATGGATGGATGAATTCAAGAATTTCTTCTATATAA
TTTCGCCAGGTGTTACAAAGGTAGATTATGGGGATATATCATCAAGACTTGGTCTAAGACACAAACTACAATGCAAACCT
TTTTCTTGGTACCTAGAGAATATTTACCCTGATTCTCAAATTCCACGTCACTATTTTTCATTGGGAGAG

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000011206 ortholog_one2one 1 retrogene
retro_btau_581,
Callithrix jacchus ENSCJAG00000021030 ortholog_one2one 2 retrogenes
retro_cjac_1554, retro_cjac_865,
Myotis lucifugus ENSMLUG00000001978 ortholog_one2many 1 retrogene
retro_mluc_163,
Mus musculus ENSMUSG00000000420 ortholog_one2one 1 retrogene
retro_mmus_1312,
Ictidomys tridecemlineatus ENSSTOG00000021306 other_paralog 1 retrogene
retro_itri_41,
Tarsius syrichta ENSTSYG00000014610 ortholog_one2one 1 retrogene
retro_tsyr_1444,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_954 82.95 51.02
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSSTOG00000003311 retrocopies