Parental gene: | ENSSTOG00000000014 |
| Aliases: | None |
| Description: | None |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393338.1:867101..877916(-) |
>ENSSTOG00000000014
ATGAGTGATCCCTCAGGAGGCTATACTTACACCCAAACTTCGATATTATTTTTTCATGCCAAGATTCCTTTTGGTTCCAA
GTCCAAGATGGCAAGTCTCAAGGATCAGCTGATTGTGAATCTTCTTAAGGAAGAACAGGTCCCCCAGAATAAGATTACAG
TTGTTGGGGTTGGTGCTGTTGGCATGGCCTGTGCCATCAGTATCTTAATGAAGGACTTGGCAGATGAACTTGCTCTTGTT
GATGTCATGGAAGATAAATTGAAGGGAGAGATGATGGATCTCCAGCATGGCAGCCTTTTCCTTAGAACACCAAAAATTGT
CTCTGGCAAAGACTATAATGTGACTGCAAACTCCAAGCTCGTCATTATCACAGCTGGGGCACGTCAGCAAGAGGGAGAAA
GCCGTCTTAATTTGGTCCAGCGTAATGTGAACATCTTCAAGTTCATCATTCCCAATGTTGTAAAATACAGCCCACATTGC
AAGTTGCTTATTGTTTCCAATCCAGTGGATATCTTGACCTATGTGGCTTGGAAGATAAGTGGCTTTCCCAAAAACCGTGT
TATTGGAAGTGGTTGCAATCTGGATTCAGCACGATTCCGTTACCTGATGGGGGAAAGGCTGGGAGTTCACCCATTAAGCT
GTCATGGGTGGGTCCTTGGGGAGCATGGAGACTCTAGTGTGCCTGTATGGAGTGGAGTGAATGTTGCTGGTGTCTCCTTG
AAGAATCTGCACCCAGATTTAGGCACTGATGCAGATAAGGAACATTGGAAAGAGGTTCATAAGCAGGTGGTTGACAGCGC
TTATGAGGTGATCAAACTAAAAGGCTATACATCCTGGGCCATTGGACTGTCTGTGGCAGATTTGGCAGAAAGTATAATGA
AGAATCTTAGACGGGTGCATCCAATTTCCACCATGATTAAGGGTCTCTATGGAATAAAGGATGATGTTTTTCTAAGTGTG
CCTTGCATCTTGGGACAAAATGGAATCTCAGATGTTGTGAAGGTGAATTTGACTCCTGAGGAAGAGGCACGTTTGAAGAA
GAGTGCAGACACACTTTGGGGAATCCAAAAAGAGCTGCAGTTTTAG
ATGAGTGATCCCTCAGGAGGCTATACTTACACCCAAACTTCGATATTATTTTTTCATGCCAAGATTCCTTTTGGTTCCAA
GTCCAAGATGGCAAGTCTCAAGGATCAGCTGATTGTGAATCTTCTTAAGGAAGAACAGGTCCCCCAGAATAAGATTACAG
TTGTTGGGGTTGGTGCTGTTGGCATGGCCTGTGCCATCAGTATCTTAATGAAGGACTTGGCAGATGAACTTGCTCTTGTT
GATGTCATGGAAGATAAATTGAAGGGAGAGATGATGGATCTCCAGCATGGCAGCCTTTTCCTTAGAACACCAAAAATTGT
CTCTGGCAAAGACTATAATGTGACTGCAAACTCCAAGCTCGTCATTATCACAGCTGGGGCACGTCAGCAAGAGGGAGAAA
GCCGTCTTAATTTGGTCCAGCGTAATGTGAACATCTTCAAGTTCATCATTCCCAATGTTGTAAAATACAGCCCACATTGC
AAGTTGCTTATTGTTTCCAATCCAGTGGATATCTTGACCTATGTGGCTTGGAAGATAAGTGGCTTTCCCAAAAACCGTGT
TATTGGAAGTGGTTGCAATCTGGATTCAGCACGATTCCGTTACCTGATGGGGGAAAGGCTGGGAGTTCACCCATTAAGCT
GTCATGGGTGGGTCCTTGGGGAGCATGGAGACTCTAGTGTGCCTGTATGGAGTGGAGTGAATGTTGCTGGTGTCTCCTTG
AAGAATCTGCACCCAGATTTAGGCACTGATGCAGATAAGGAACATTGGAAAGAGGTTCATAAGCAGGTGGTTGACAGCGC
TTATGAGGTGATCAAACTAAAAGGCTATACATCCTGGGCCATTGGACTGTCTGTGGCAGATTTGGCAGAAAGTATAATGA
AGAATCTTAGACGGGTGCATCCAATTTCCACCATGATTAAGGGTCTCTATGGAATAAAGGATGATGTTTTTCTAAGTGTG
CCTTGCATCTTGGGACAAAATGGAATCTCAGATGTTGTGAAGGTGAATTTGACTCCTGAGGAAGAGGCACGTTTGAAGAA
GAGTGCAGACACACTTTGGGGAATCCAAAAAGAGCTGCAGTTTTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000009211 | possible_ortholog | 8 retrogenes | |
| Dipodomys ordii | ENSDORG00000003524 | ortholog_one2one | 2 retrogenes | |
| Felis catus | ENSFCAG00000015735 | possible_ortholog | 4 retrogenes | |
| Myotis lucifugus | ENSMLUG00000016343 | possible_ortholog | 4 retrogenes | |
| Mustela putorius furo | ENSMPUG00000013730 | possible_ortholog | 5 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000022058 | within_species_paralog | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000008062 | possible_ortholog | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_535 | 69.67 | 92.24 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_itri_1396 | 79.34 | 91.97 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_itri_1526 | 89.92 | 68.14 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000000014 retrocopies