Parental gene:

GLO1, ENSSSCG00000027778

Aliases:None
Description:glyoxalase I [Source:HGNC Symbol;Acc:4323]
Organism:Pig (Sus scrofa)
Coordinates:7:39241000..39271606(-)


>ENSSSCG00000027778
ATGGCAGAACCGCAGCTCGCGTCCAGCGGCCTCACCGACGAGGCTGCCCTCGCCTGCTGCTCCGACCCGGACCCCAGCAC
CAAGGATTTTCTTTTTCAGCAGACCATGCTTCGAATTAAGGATCCTAAGAAGTCATTGGATTTTTATACTAGAATTCTTG
GAATGACGCTACTCCAAAAATTAGATTTTCCCACTATGAAATTTTCACTCTATTTCTTGGCTTATGAGGATAAAAATGAC
ATCCCAAAAGATAAAAGTGAAAAAGCAGCATGGGCATTCTCCAGAAAAGCTACGCTTGAACTGACACACAATTGGGGCAC
TGAAGACGATGAGAGCCAGAGTTACCACAGTGGCAATTCAGATCCTCGGGGATTTGGTCACATTGGAATTGCTGTTCCTG
ATGTTCACGGTGCTTGTAAAAGATTTGAAGAACTAGGAGTCAAATTTGTGAAGAAACCTGATGATGGTAAAATGAAAGGC
TTGGCATTTATTCAAGATCCTGATGGCTACTGGATCGAAATTTTGAATCCTAACAATATGATAACTATTATTTAG

Library Parental gene expression (RPM)
SRP014902_placenta 38 .09 RPM
SRP014902_testis 46 .25 RPM
SRP018856_adipose 81 .16 RPM
SRP018288_kidney 271 .38 RPM
SRP018288_lung 47 .76 RPM
SRP018288_liver 231 .55 RPM
SRP018288_heart 107 .08 RPM
SRP035408_liver 201 .56 RPM
SRP035408_brain 151 .72 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000012703 ortholog_one2one 2 retrogenes
retro_btau_1003, retro_btau_1513,
Cavia porcellus ENSCPOG00000010050 ortholog_one2one 1 retrogene
retro_cpor_1482,
Dasypus novemcinctus ENSDNOG00000019598 ortholog_one2one 6 retrogenes
retro_dnov_1016, retro_dnov_1064, retro_dnov_1411, retro_dnov_1759, retro_dnov_2560, retro_dnov_735,
Dipodomys ordii ENSDORG00000006369 ortholog_one2many 1 retrogene
retro_dord_21,
Macropus eugenii ENSMEUG00000005978 ortholog_one2one 1 retrogene
retro_meug_1641,
Mus musculus ENSMUSG00000024026 ortholog_one2one 1 retrogene
retro_mmus_1902,
Otolemur garnettii ENSOGAG00000007945 ortholog_one2one 2 retrogenes
retro_ogar_2541, retro_ogar_681,
Rattus norvegicus ENSRNOG00000000541 ortholog_one2one 2 retrogenes
retro_rnor_1012, retro_rnor_1024,
Ictidomys tridecemlineatus ENSSTOG00000005821 ortholog_one2one 1 retrogene
retro_itri_1626,
Tupaia belangeri ENSTBEG00000014386 ortholog_one2one 1 retrogene
retro_tbel_4376,
Tursiops truncatus ENSTTRG00000004664 ortholog_one2one 1 retrogene
retro_ttru_90,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_853 81.56 96.20
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Download FASTA sequences of all ENSSSCG00000027778 retrocopies