Parental gene:

TYMS, ENSSSCG00000023869

Aliases:None
Description:thymidylate synthetase [Source:HGNC Symbol;Acc:12441]
Organism:Pig (Sus scrofa)
Coordinates:GL896245.1:45133..48316(-)


>ENSSSCG00000023869
GCAGATTATTCAGGGCAAGGAGTAGACCAACTGCAAAAAGTGATCGACACAATCAAAACCAACCCTGACGACAGAAGAAT
CATCCTGTGTGCTTGGAATCCGAAAGATCTCCCTCTCATGGCCCTCCCCCCATGCCATGCCCTTTGCCAGTTCTACGTGG
TAAATGGGGAGCTGTCCTGCCAGTTGTACCAGCGGTCGGGAGACATGGGACTGGGTGTGCCCTTCAACATCGCCAGCTAC
GCCCTGCTCACCTACATGATCGCACACATCACAGGCCTGAAGCCAGGTGACTTCGTACACACGTTGGGAGATGCCCACAT
TTACCTGAATCACATTGAGCCGCTGAAAATACAGCTTCAGCGGGAACCAAGGCCTTTCCCGAAACTCAAAATCCTTCGAA
AAGTTGAGAAAATCGATGACTTCAAGGCTGAAGACTTTCAGATCGAAGGTTACAATCCTCATCCGACTATTAAAATGGAA
ATGGCTGTTTAG

Library Parental gene expression (RPM)
SRP014902_placenta 1 .46 RPM
SRP014902_testis 9 .48 RPM
SRP018856_adipose 0 .68 RPM
SRP018288_kidney 0 .99 RPM
SRP018288_lung 2 .95 RPM
SRP018288_liver 1 .92 RPM
SRP018288_heart 1 .07 RPM
SRP035408_liver 2 .67 RPM
SRP035408_brain 0 .25 RPM



Species Parental gene accession Homology type Retrogenes number
Loxodonta africana ENSLAFG00000014910 ortholog_one2one 2 retrogenes
retro_lafr_1030, retro_lafr_635,
Macropus eugenii ENSMEUG00000009507 ortholog_one2one 1 retrogene
retro_meug_175,
Monodelphis domestica ENSMODG00000021479 ortholog_one2many 2 retrogenes
retro_mdom_1084, retro_mdom_1186,
Mus musculus ENSMUSG00000025747 ortholog_one2one 1 retrogene
retro_mmus_584,
Otolemur garnettii ENSOGAG00000024349 ortholog_one2one 2 retrogenes
retro_ogar_2956, retro_ogar_3211,
Sarcophilus harrisii ENSSHAG00000003102 ortholog_one2one 1 retrogene
retro_shar_424,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_810 68.64 98.77
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2. retro_sscr_841 76.58 66.87
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Download FASTA sequences of all ENSSSCG00000023869 retrocopies