Parental gene: | ARIH1, ENSSSCG00000001922 |
| Aliases: | None |
| Description: | ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila) [Source:HGNC Symbol;Acc:689] |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | 7:65167883..65205814(+) |
>ENSSSCG00000001922
ATGTGTAGTGATTTTTCTGCTAATGTTTTTTTTAAAGTCCATGTATTATTTTTGTTGCAGTATTTCACTGGCCTTGAATG
TGGACATAAGTTTTGTATGCAGTGCTGGAGTGAATATTTAACTACCAAAATAATGGAAGAAGGCATGGGACAGACTATTT
CGTGTCCTGCTCATGGTTGTGATATTTTAGTGGATGACAACACAGTTATGCGCCTGATCACAGATTCAAAAGTTAAATTA
AAGTATCAGCATTTAATAACAAATAGTTTTGTAGAGTGTAATCGACTGTTAAAGTGGTGTCCTGCCCCAGATTGCCACCA
TGTTGTGAAAGTTCAATATCCTGACGCTAAACCTGTTCGCTGCAAATGTGGGCGCCAGTTTTGCTTTAACTGTGGAGAAA
ATTGGCATGACCCTGTAAAGTGTAAGTGGTTGAAGAAGTGGATTAAAAAGTGTGATGATGACAGTGAAACTTCTAATTGG
ATTGCAGCTAACACAAAGGAATGTCCCAAATGCCATGTCACAATTGAGAAGGATGGCGGTTGTAATCACATGGTCTGTCG
TAACCAGAACTGTAAAGCAGAGTTTTGCTGGGTGTGTCTTGGCCCTTGGGAACCACATGGATCTGCCTGGTACAACTGTA
ACCGCTATAATGAGGATGATGCAAAGGCAGCAAGAGACGCACAAGAGCGATCAAGGGCAGCCCTGCAGAGGTACCTGTTC
TACTGTAATCGCTATATGAACCACATGCAGAGTCTACGCTTTGAGCACAAACTCTATGCTCAGGTGAAGCAGAAAATGGA
GGAGATGCAGCAGCACAACATGTCCTGGATTGAGAATAACCAAGCAGATCTAGAGAATGCCACAGAGGTGCTCTCGGGCT
ACCTTGAACGAGATATTTCCCAAGACTCTCTGCAGGATATAAAGCAGAAAGTACAAGATAAGTACAGATACTGTGAGAGT
CGACGAAGGGTTTTGTTACAGCATGTGCATGAAGGCTATGAAAAAGATCTGTGGGAGTACATTGAGGACTGA
ATGTGTAGTGATTTTTCTGCTAATGTTTTTTTTAAAGTCCATGTATTATTTTTGTTGCAGTATTTCACTGGCCTTGAATG
TGGACATAAGTTTTGTATGCAGTGCTGGAGTGAATATTTAACTACCAAAATAATGGAAGAAGGCATGGGACAGACTATTT
CGTGTCCTGCTCATGGTTGTGATATTTTAGTGGATGACAACACAGTTATGCGCCTGATCACAGATTCAAAAGTTAAATTA
AAGTATCAGCATTTAATAACAAATAGTTTTGTAGAGTGTAATCGACTGTTAAAGTGGTGTCCTGCCCCAGATTGCCACCA
TGTTGTGAAAGTTCAATATCCTGACGCTAAACCTGTTCGCTGCAAATGTGGGCGCCAGTTTTGCTTTAACTGTGGAGAAA
ATTGGCATGACCCTGTAAAGTGTAAGTGGTTGAAGAAGTGGATTAAAAAGTGTGATGATGACAGTGAAACTTCTAATTGG
ATTGCAGCTAACACAAAGGAATGTCCCAAATGCCATGTCACAATTGAGAAGGATGGCGGTTGTAATCACATGGTCTGTCG
TAACCAGAACTGTAAAGCAGAGTTTTGCTGGGTGTGTCTTGGCCCTTGGGAACCACATGGATCTGCCTGGTACAACTGTA
ACCGCTATAATGAGGATGATGCAAAGGCAGCAAGAGACGCACAAGAGCGATCAAGGGCAGCCCTGCAGAGGTACCTGTTC
TACTGTAATCGCTATATGAACCACATGCAGAGTCTACGCTTTGAGCACAAACTCTATGCTCAGGTGAAGCAGAAAATGGA
GGAGATGCAGCAGCACAACATGTCCTGGATTGAGAATAACCAAGCAGATCTAGAGAATGCCACAGAGGTGCTCTCGGGCT
ACCTTGAACGAGATATTTCCCAAGACTCTCTGCAGGATATAAAGCAGAAAGTACAAGATAAGTACAGATACTGTGAGAGT
CGACGAAGGGTTTTGTTACAGCATGTGCATGAAGGCTATGAAAAAGATCTGTGGGAGTACATTGAGGACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 10 .35 RPM |
| SRP014902_testis | 19 .80 RPM |
| SRP018856_adipose | 27 .31 RPM |
| SRP018288_kidney | 19 .01 RPM |
| SRP018288_lung | 13 .95 RPM |
| SRP018288_liver | 15 .83 RPM |
| SRP018288_heart | 30 .52 RPM |
| SRP035408_liver | 15 .24 RPM |
| SRP035408_brain | 14 .13 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Otolemur garnettii | ENSOGAG00000012095 | ortholog_one2one | 1 retrogene | |
| Drosophila melanogaster | FBgn0017418 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_142 | 84.11 | 62.10 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_sscr_200 | 84.11 | 62.10 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSSCG00000001922 retrocopies