Parental gene:

CSTB, ENSSHAG00000017952

Aliases:None
Description:cystatin B (stefin B) [Source:HGNC Symbol;Acc:2482]
Organism:Tasmanian devil (Sarcophilus harrisii)
Coordinates:GL849534.1:3128937..3134879(-)


>ENSSHAG00000017952
GCCTCTAGATTTGCAAAGATGATGTGCGGAGGAACTTCTGCCACGAAACCGGCCACCGCTGAAACGCAGCGGATTGCTGA
TGAGGTAAAGACACAGCTTGAAGCAAAAGAAAATAGGAAGTTTCCAGTCTTTAAGACGATGGAATTTAAAAGTCAAGTGG
TTGCTGGAACAAACTACTTTATTAAGGTTCATGTTGGTGAAGAGGAATTCATACATATGCGAGTATTTGAAAGTCTCCCT
CATGAAAACAAGCCATTGCTTCTCTCCAGTTATCAGACCAACAAAACCAAGGATGATGAACTGGCCTATTTTTAG

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000000524 ortholog_one2many 1 retrogene
retro_btau_97,
Loxodonta africana ENSLAFG00000002664 ortholog_one2one 1 retrogene
retro_lafr_370,
Myotis lucifugus ENSMLUG00000022457 ortholog_one2many 1 retrogene
retro_mluc_379,
Macaca mulatta ENSMMUG00000012303 ortholog_one2one 1 retrogene
retro_mmul_1609,
Otolemur garnettii ENSOGAG00000006101 ortholog_one2one 2 retrogenes
retro_ogar_3274, retro_ogar_3275,
Pteropus vampyrus ENSPVAG00000007022 ortholog_one2one 1 retrogene
retro_pvam_1089,
Rattus norvegicus ENSRNOG00000001201 ortholog_one2one 1 retrogene
retro_rnor_551,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_shar_229 64.52 88.46
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2. retro_shar_623 55.14 99.04
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3. retro_shar_699 59.81 100.00
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Download FASTA sequences of all ENSSHAG00000017952 retrocopies