Parental gene:

SNRPF, ENSSHAG00000012294

Aliases:None
Description:small nuclear ribonucleoprotein polypeptide F [Source:HGNC Symbol;Acc:11162]
Organism:Tasmanian devil (Sarcophilus harrisii)
Coordinates:GL861598.1:1003994..1010513(+)


>ENSSHAG00000012294
GACGGCGACTCACTTCACGTGGGGACAGGAGAATCGGCAGCGGCGGGCGGCCAGTGGCGCTCTTCGGTGGTCACCACGAG
TTTACCCCTCAATCCCAAACCTTTCCTGAATGGACTGACAGGGAAACCAGTGATGGTGAAGCTTAAGTGGGGAATGGAGT
ACAAAGGTTACCTCGTCTCTGTGGATGGCTACATGAACATGCAACTTGCAAATACAGAAGAATACATTGATGGGGCATTG
TCTGGACACCTTGGTGAAGTTTTAATAAGGTGCAATAATGTCCTTTACATCAGAGGTGTCGAAGAAGAGGAAGAAGATGG
GGAAATGAGAGAATAG

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000002166 ortholog_one2one 3 retrogenes
retro_amel_1239, retro_amel_42, retro_amel_883,
Canis familiaris ENSCAFG00000006395 possible_ortholog 6 retrogenes
retro_cfam_110, retro_cfam_1975, retro_cfam_372, retro_cfam_619, retro_cfam_742, retro_cfam_763,
Callithrix jacchus ENSCJAG00000002705 possible_ortholog 2 retrogenes
retro_cjac_1705, retro_cjac_3039,
Erinaceus europaeus ENSEEUG00000013509 ortholog_one2one 4 retrogenes
retro_eeur_241, retro_eeur_465, retro_eeur_467, retro_eeur_636,
Felis catus ENSFCAG00000029966 possible_ortholog 4 retrogenes
retro_fcat_280, retro_fcat_66, retro_fcat_77, retro_fcat_861,
Loxodonta africana ENSLAFG00000017426 ortholog_one2one 1 retrogene
retro_lafr_241,
Pelodiscus sinensis ENSPSIG00000016462 ortholog_one2one 2 retrogenes
retro_psin_31, retro_psin_54,
Tarsius syrichta ENSTSYG00000006837 ortholog_one2one 4 retrogenes
retro_tsyr_1239, retro_tsyr_1782, retro_tsyr_192, retro_tsyr_2115,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_shar_468 52.94 74.77
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Download FASTA sequences of all ENSSHAG00000012294 retrocopies