Parental gene: | ATF1, ENSSHAG00000004637 |
| Aliases: | None |
| Description: | activating transcription factor 1 [Source:HGNC Symbol;Acc:783] |
| Organism: | Tasmanian devil (Sarcophilus harrisii) |
| Coordinates: | GL861561.1:114065..142031(-) |
>ENSSHAG00000004637
ATGGAAGATTCCCACAAAAGTAACAGTTCAGAGACAGCACCACAACCAGGTACAACAGTGCAGGGTGCTCATATCTCTCA
CATTGCTCAACAGATGTCACTAAGAGGAGCTGCACCAATGACAGTTGTACATCTTTCTGGAGAACAAGTACAGAGTCAGG
GGGTCATCCAGACTGCTCATTCGTCTTCAGTAATCCACCCCCCGCAAGTACAGACAGTTCAGGTATCATCCTGGTCAGAT
AGTGAGGATTCTCAGGATTCATCTGATAGCATAGGCTCTTCACAGAAAGCTCGGGGGATTCTGGCACGGCGTCCATCTTA
TAAAAAAATCTTGAACGATCTTTCTTCAGAAGACACCAGAGATAGGAAAGGGGACGCAGAAAGCCCTGGAGTTTCAACAG
TCACATCTATGTCTGTCCCAACTCCTATCTACCAGACCAGTACTGGACAATACATTGCTATTGCCCCAAATGGAACATTA
CAGCTGGCCAGTCCAAGCACAGAGGCAGTACAGGGGTTACAAGCATTAACGATGACAAATGCAAGCAATACTCAACAAGG
AACAACAATTCTTCAATATGCACAAACATCTGATGGACAGCAGATACTTGTCCCTAGCAACCAAGTGGTTGTACAGACTG
CATCAGGAGATATGCAGACTTATCAGATTCGTGCCACACCAGCAAATACTAATCTTCCACAGACAGTAGTGATGACATCT
CCAGTCACTTTAACATCTCAGACAACCAAAACAGATGATCCACAGATGAAAAGAGAAATAAGATTGATGAAAAATAGAGA
AGCTGCTCGAGAATGCCGTAGAAAGAAAAAAGAATATGTTAAGTGTCTGGAAAATCGTGTTGCAGTCTTGGAAAATCAAA
ATAAAACTTTAATAGAAGAATTAAAAACTTTAAAAGATCTCTACTCCCATAAAAATGTTTAA
ATGGAAGATTCCCACAAAAGTAACAGTTCAGAGACAGCACCACAACCAGGTACAACAGTGCAGGGTGCTCATATCTCTCA
CATTGCTCAACAGATGTCACTAAGAGGAGCTGCACCAATGACAGTTGTACATCTTTCTGGAGAACAAGTACAGAGTCAGG
GGGTCATCCAGACTGCTCATTCGTCTTCAGTAATCCACCCCCCGCAAGTACAGACAGTTCAGGTATCATCCTGGTCAGAT
AGTGAGGATTCTCAGGATTCATCTGATAGCATAGGCTCTTCACAGAAAGCTCGGGGGATTCTGGCACGGCGTCCATCTTA
TAAAAAAATCTTGAACGATCTTTCTTCAGAAGACACCAGAGATAGGAAAGGGGACGCAGAAAGCCCTGGAGTTTCAACAG
TCACATCTATGTCTGTCCCAACTCCTATCTACCAGACCAGTACTGGACAATACATTGCTATTGCCCCAAATGGAACATTA
CAGCTGGCCAGTCCAAGCACAGAGGCAGTACAGGGGTTACAAGCATTAACGATGACAAATGCAAGCAATACTCAACAAGG
AACAACAATTCTTCAATATGCACAAACATCTGATGGACAGCAGATACTTGTCCCTAGCAACCAAGTGGTTGTACAGACTG
CATCAGGAGATATGCAGACTTATCAGATTCGTGCCACACCAGCAAATACTAATCTTCCACAGACAGTAGTGATGACATCT
CCAGTCACTTTAACATCTCAGACAACCAAAACAGATGATCCACAGATGAAAAGAGAAATAAGATTGATGAAAAATAGAGA
AGCTGCTCGAGAATGCCGTAGAAAGAAAAAAGAATATGTTAAGTGTCTGGAAAATCGTGTTGCAGTCTTGGAAAATCAAA
ATAAAACTTTAATAGAAGAATTAAAAACTTTAAAAGATCTCTACTCCCATAAAAATGTTTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000004733 | ortholog_one2many | 5 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000008000 | ortholog_one2one | 2 retrogenes | |
| Felis catus | ENSFCAG00000013892 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000123268 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000003301 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000023027 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000017023 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000026029 | ortholog_one2one | 1 retrogene | |
| Procavia capensis | ENSPCAG00000010038 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_shar_221 | 88.17 | 62.59 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_shar_635 | 69.36 | 63.33 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSHAG00000004637 retrocopies