Parental gene: | ATF1, ENSFCAG00000013892 |
| Aliases: | None |
| Description: | activating transcription factor 1 [Source:HGNC Symbol;Acc:783] |
| Organism: | Cat (Felis catus) |
| Coordinates: | B4:80089138..80119754(+) |
>ENSFCAG00000013892
TCTGCGCCAGTGACAATTATACCTCTTCCTGGAGAGCAAGTACAGGTTCAGGGGGTCATCCAGACAGCTCAGTCTTCTGT
AATTCACCCACCACACGTGCAAACGGTACAGGTGTCATCTTTATCAGAAAGTGAGGAGTCTCAGGACTCATCAGACAGTA
TAGGCTCTTCACAGAAAGCCCACGGGATCCTAGCACGGCGCCCATCTTACAGAAAAATTTTGAAAGATCTATCCTCTGAA
GATACACGGGGCAGAAAAGGAGACGGAGAAAACCCTGGAGTTTCTGCTGTCACTTCTATGTCTGTTCCAACTCCCATCTA
TCAAACTAGCAGTGGACAGTACATTAAAGTTGCCATTGCCCCAAATGGAGCCTTACAACTGGCCAGCCCAGGCACAGATG
GAGTACAGGGACTTCAAACATTAACCATGACAAATTCAGGCAGTACTCAGCAAGGGACAACAATTCTCCAATATGCACAG
ACCTCTGATGGACAGCAAATACTTGTGCCCAGCAACCAGGTGGTTGTACAAACTGCATCAGGAGATATGCAGACGTATCA
GATCCGTACCACACCTTCAGCTACTTCGCTGCCACAGACTGTGGTGATGACATCTCCTGTGACTCTTACATCTCAGACAT
CTAAGACAGATGACCCCCAACTGAAGAGAGAAATAAGGTTGATGAAAAACAGAGAAGCTGCTCGAGAATGTCGCAGAAAG
AAGAAAGAATATGTGAAATGCCTGGAAAATCGAGTTGCAGTCTTGGAAAATCAAAATAAAACTCTAATAGAAGAGTTAAA
AACTTTGAAGGATCTTTATTCTCATAAAAGTGTTTGA
TCTGCGCCAGTGACAATTATACCTCTTCCTGGAGAGCAAGTACAGGTTCAGGGGGTCATCCAGACAGCTCAGTCTTCTGT
AATTCACCCACCACACGTGCAAACGGTACAGGTGTCATCTTTATCAGAAAGTGAGGAGTCTCAGGACTCATCAGACAGTA
TAGGCTCTTCACAGAAAGCCCACGGGATCCTAGCACGGCGCCCATCTTACAGAAAAATTTTGAAAGATCTATCCTCTGAA
GATACACGGGGCAGAAAAGGAGACGGAGAAAACCCTGGAGTTTCTGCTGTCACTTCTATGTCTGTTCCAACTCCCATCTA
TCAAACTAGCAGTGGACAGTACATTAAAGTTGCCATTGCCCCAAATGGAGCCTTACAACTGGCCAGCCCAGGCACAGATG
GAGTACAGGGACTTCAAACATTAACCATGACAAATTCAGGCAGTACTCAGCAAGGGACAACAATTCTCCAATATGCACAG
ACCTCTGATGGACAGCAAATACTTGTGCCCAGCAACCAGGTGGTTGTACAAACTGCATCAGGAGATATGCAGACGTATCA
GATCCGTACCACACCTTCAGCTACTTCGCTGCCACAGACTGTGGTGATGACATCTCCTGTGACTCTTACATCTCAGACAT
CTAAGACAGATGACCCCCAACTGAAGAGAGAAATAAGGTTGATGAAAAACAGAGAAGCTGCTCGAGAATGTCGCAGAAAG
AAGAAAGAATATGTGAAATGCCTGGAAAATCGAGTTGCAGTCTTGGAAAATCAAAATAAAACTCTAATAGAAGAGTTAAA
AACTTTGAAGGATCTTTATTCTCATAAAAGTGTTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 6 .67 RPM |
| SRP017611_kidney | 7 .21 RPM |
| SRP017611_brain | 2 .98 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000004733 | possible_ortholog | 5 retrogenes | |
| Microcebus murinus | ENSMICG00000003301 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000004637 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_fcat_1284 | 85.12 | 86.69 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSFCAG00000013892 retrocopies