Parental gene: | VDAC1, ENSSARG00000008221 |
| Aliases: | None |
| Description: | voltage-dependent anion channel 1 [Source:HGNC Symbol;Acc:12669] |
| Organism: | Shrew (Sorex araneus) |
| Coordinates: | GeneScaffold_1950:26467..74685(-) |
>ENSSARG00000008221
ATGGCTGTGCCTCCCACGTATGTCGATCTTGGCAAACCTGCCCGAGATGTCTTCACCAAGGGCTATGNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNGAAGAAAAATGCTAAAATCAAGACAGGCTACAAGCGGGAGCACATCAACCTGGGCTGCGACGTGGATTTCGACATCG
CTGGGCCTTCCATCCGGGGCGCCCTGGTGCTGGCCTACGAGGGCTGGCTGGCCGGCTACCAGATGAACTTTGAGACTGCC
AAGTCACGCGTGACCCAGAGCAACTTTGCGGTCGGCTACAAGACTGACGAGTTCCAGCTTCACACGAACGTAAATGACGG
GACAGAGTTTGGTGGCTCCATTTACCAGAAGGTGAACAAGAAGTTGGAGACGGCCGTTAACCTCGCTTGGACCGCAGGCA
ACAGCAACACTCGCTTCGGCATAGCAGCCAAGTATCAGATCGACCCCGATGCCTGCTTCTCGGCTAAAGTGAACAATTCC
AGCCTGATAGGATTAGGATACACTCAGACCCTAAAGCCAGGTATCAAACTGACACTGTCAGCTCTGCTGGACGGCAAGAA
TGTCAACGCAGGTGGCCACAAGCTTGGTCTAGGACTGGAATTTCAAGCATAA
ATGGCTGTGCCTCCCACGTATGTCGATCTTGGCAAACCTGCCCGAGATGTCTTCACCAAGGGCTATGNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNGAAGAAAAATGCTAAAATCAAGACAGGCTACAAGCGGGAGCACATCAACCTGGGCTGCGACGTGGATTTCGACATCG
CTGGGCCTTCCATCCGGGGCGCCCTGGTGCTGGCCTACGAGGGCTGGCTGGCCGGCTACCAGATGAACTTTGAGACTGCC
AAGTCACGCGTGACCCAGAGCAACTTTGCGGTCGGCTACAAGACTGACGAGTTCCAGCTTCACACGAACGTAAATGACGG
GACAGAGTTTGGTGGCTCCATTTACCAGAAGGTGAACAAGAAGTTGGAGACGGCCGTTAACCTCGCTTGGACCGCAGGCA
ACAGCAACACTCGCTTCGGCATAGCAGCCAAGTATCAGATCGACCCCGATGCCTGCTTCTCGGCTAAAGTGAACAATTCC
AGCCTGATAGGATTAGGATACACTCAGACCCTAAAGCCAGGTATCAAACTGACACTGTCAGCTCTGCTGGACGGCAAGAA
TGTCAACGCAGGTGGCCACAAGCTTGGTCTAGGACTGGAATTTCAAGCATAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000013556 | possible_ortholog | 8 retrogenes | |
| Cavia porcellus | ENSCPOG00000023840 | ortholog_one2many | 2 retrogenes | |
| Dipodomys ordii | ENSDORG00000000714 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000008421 | possible_ortholog | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000010880 | possible_ortholog | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000016235 | possible_ortholog | 6 retrogenes | |
| Monodelphis domestica | ENSMODG00000014157 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000010220 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000020402 | ortholog_one2one | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000009369 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000030742 | possible_ortholog | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000006375 | ortholog_one2many | 8 retrogenes | |
| Sorex araneus | ENSSARG00000011194 | within_species_paralog | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000007764 | ortholog_one2one | 3 retrogenes | |
| Tupaia belangeri | ENSTBEG00000003852 | ortholog_one2one | 4 retrogenes | |
| Tarsius syrichta | ENSTSYG00000007346 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sara_115 | 87.50 | 61.84 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_sara_327 | 89.27 | 61.84 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_sara_355 | 85.71 | 61.48 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_sara_533 | 67.43 | 61.84 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_sara_668 | 89.27 | 61.84 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_sara_702 | 67.43 | 61.84 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSARG00000008221 retrocopies