Parental gene: | Rpl10, ENSRNOG00000027149 |
| Aliases: | None |
| Description: | 60S ribosomal protein L10 [Source:UniProtKB/Swiss-Prot;Acc:Q6PDV7] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 1:152178397..152180608(-) |
>ENSRNOG00000027149
ATGGGCCGCCGCCCCGCCCGGTGTTATCGCTATTGTAAGAACAAGCCATACCCAAAGTCTCGTTTCTGTCGTGGTGTCCC
TGATGCTAAGATCCGCATCTTTGACTTGGGACGGAAGAAAGCAAAAGTGGATGAATTCCCACTTTGTGGCCACATGGTGT
CAGATGAATATGAACAACTCTCTTCTGAAGCACTGGAGGCTGCCCGTATTTGTGCCAACAAATACATGGTAAAGAGTTGT
GGCAAGGATGGCTTTCATATCCGGGTGAGGCTCCACCCTTTCCATGTCATCCGTATCAACAAGATGTTGTCCTGTGCTGG
GGCTGACAGGCTCCAGACAGGTATGCGTGGTGCCTTTGGGAAGCCCCAGGGCACAGTAGCCAGGGTTCACATTGGCCAAG
TCATCATGTCTATCCGAACCAAGCTGCAGAATAAGGAACATGTGATTGAGGCTCTGCGCAGGGCCAAGTTCAAGTTCCCT
GGCCGCCAGAAGATCCACATCTCAAAGAAATGGGGTTTTACCAAGTTCAATGCAGATGAATTTGAAGACATGGTTGCTGA
GAAGCGGCTCATTCCTGATGGCTGTGGTGTCAAATATATCCCCAATCGTGGTCCTCTTGACAAGTGGAGAGCCCTGCATT
CCTGA
ATGGGCCGCCGCCCCGCCCGGTGTTATCGCTATTGTAAGAACAAGCCATACCCAAAGTCTCGTTTCTGTCGTGGTGTCCC
TGATGCTAAGATCCGCATCTTTGACTTGGGACGGAAGAAAGCAAAAGTGGATGAATTCCCACTTTGTGGCCACATGGTGT
CAGATGAATATGAACAACTCTCTTCTGAAGCACTGGAGGCTGCCCGTATTTGTGCCAACAAATACATGGTAAAGAGTTGT
GGCAAGGATGGCTTTCATATCCGGGTGAGGCTCCACCCTTTCCATGTCATCCGTATCAACAAGATGTTGTCCTGTGCTGG
GGCTGACAGGCTCCAGACAGGTATGCGTGGTGCCTTTGGGAAGCCCCAGGGCACAGTAGCCAGGGTTCACATTGGCCAAG
TCATCATGTCTATCCGAACCAAGCTGCAGAATAAGGAACATGTGATTGAGGCTCTGCGCAGGGCCAAGTTCAAGTTCCCT
GGCCGCCAGAAGATCCACATCTCAAAGAAATGGGGTTTTACCAAGTTCAATGCAGATGAATTTGAAGACATGGTTGCTGA
GAAGCGGCTCATTCCTGATGGCTGTGGTGTCAAATATATCCCCAATCGTGGTCCTCTTGACAAGTGGAGAGCCCTGCATT
CCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 218 .39 RPM |
| SRP017611_kidney | 230 .91 RPM |
| SRP017611_brain | 114 .60 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000011822 | ortholog_one2one | 5 retrogenes | |
| Felis catus | ENSFCAG00000011395 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000013163 | possible_ortholog | 3 retrogenes | |
| Monodelphis domestica | ENSMODG00000008731 | possible_ortholog | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000015919 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_270 | 98.60 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_482 | 50.38 | 60.28 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_rnor_1007 | 86.43 | 65.42 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_rnor_1090 | 67.24 | 80.37 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_rnor_2998 | 71.16 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000027149 retrocopies