Parental gene: | Hormad1, ENSRNOG00000021160 |
| Aliases: | Hormad1, RGD1564960 |
| Description: | HORMA domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D3ZWE7] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 2:217171289..217206779(+) |
>ENSRNOG00000021160
ATGGCCACTATGCAGTTGCGGAGGACAGCTTCTATGAGTGCATTGGTATTTCCTAATAAGATATCAACCGAGCAGCAGTC
TTTGATGTTTGTGAAGAGGCTCCTGGCTGTTTCAGTATCCTGCATTACCTATTTGAGAGGAATATTTCCAGAACGTGCTT
ATGGGACAAGATATCTGGATGATCTCTGTGTCAAAATTCTGAAAGAAGATAAAAATTGTCCAGGTTCTTCACAGCTAGTT
AAGTGGATGCTAGGATGCTATGATGCTCTACAGAAGAAATATCTAAGGATGATCATTCTAGCCGTATATACCAATCCAGA
AGATCCTCAGACAATTTCAGAATGTTACCAGTTTAAATTCAAGTACACCAAAAATGGACCAATCATGGACTTTATAAGCA
AAAATCAAAACAATAAATCTAGTACAACATCTGCTGACACCAAGAAAGCAAGTATTCTCCTCATTCGGAAGATTTATGTC
CTAATGCAAAATCTAGGGCCATTACCTAATGATGTTTGTCTGACCATGAAACTTTTTTACTACGATGAAGTTACACCCCC
AGATTACCAGCCACCAGGTTTTAAGGATGGTGATTGTGAAGGAGTAATATTTGATGGGGACCCTACATACTTAAATGTGG
GAGAAGTCCCAACACCTTTTCACACCTTCAGATTAAAAGTGACCACTGAGAAGGAACGAATGGAAAATATTGATTCAGCC
ATACTAACACCAAAAGATTCAAAAATACCATTTCAAAAAATTCTAATGGACAAAGATGATGTAGAAGATGAAAATCATAA
TAATTTTGATATTAAAACTAAAATGAACGAACAGAATGAAAACTCTGGAACTTCTGAAATCAAAGAACCAAATTTAGATT
GTAAGGAAGAAGAAATTATGCAATTCAAAAAGAACCAAAGTTCTTCAATTTCTCAGTGTCAGGTTGAACAGTTAATCAGT
AAAACATCTGAACTTGATGTGTCTGAAAGCAAAACAAGAAGTGGAAAAATCTTTCAGTGTAAAATGGTAAATGGAAATCA
ACAAGGACAAATTTCTAAAGAAAATCGGAAGAGAAGTCTTCGTCAATCTGGGAAAACAGTCCTTCATATCTTGGAATCTT
CTAGTCAAGAGTCGGTGCTGAAGAGAAGGAGAGTTAGTGAACCAAATGAACATACCTAA
ATGGCCACTATGCAGTTGCGGAGGACAGCTTCTATGAGTGCATTGGTATTTCCTAATAAGATATCAACCGAGCAGCAGTC
TTTGATGTTTGTGAAGAGGCTCCTGGCTGTTTCAGTATCCTGCATTACCTATTTGAGAGGAATATTTCCAGAACGTGCTT
ATGGGACAAGATATCTGGATGATCTCTGTGTCAAAATTCTGAAAGAAGATAAAAATTGTCCAGGTTCTTCACAGCTAGTT
AAGTGGATGCTAGGATGCTATGATGCTCTACAGAAGAAATATCTAAGGATGATCATTCTAGCCGTATATACCAATCCAGA
AGATCCTCAGACAATTTCAGAATGTTACCAGTTTAAATTCAAGTACACCAAAAATGGACCAATCATGGACTTTATAAGCA
AAAATCAAAACAATAAATCTAGTACAACATCTGCTGACACCAAGAAAGCAAGTATTCTCCTCATTCGGAAGATTTATGTC
CTAATGCAAAATCTAGGGCCATTACCTAATGATGTTTGTCTGACCATGAAACTTTTTTACTACGATGAAGTTACACCCCC
AGATTACCAGCCACCAGGTTTTAAGGATGGTGATTGTGAAGGAGTAATATTTGATGGGGACCCTACATACTTAAATGTGG
GAGAAGTCCCAACACCTTTTCACACCTTCAGATTAAAAGTGACCACTGAGAAGGAACGAATGGAAAATATTGATTCAGCC
ATACTAACACCAAAAGATTCAAAAATACCATTTCAAAAAATTCTAATGGACAAAGATGATGTAGAAGATGAAAATCATAA
TAATTTTGATATTAAAACTAAAATGAACGAACAGAATGAAAACTCTGGAACTTCTGAAATCAAAGAACCAAATTTAGATT
GTAAGGAAGAAGAAATTATGCAATTCAAAAAGAACCAAAGTTCTTCAATTTCTCAGTGTCAGGTTGAACAGTTAATCAGT
AAAACATCTGAACTTGATGTGTCTGAAAGCAAAACAAGAAGTGGAAAAATCTTTCAGTGTAAAATGGTAAATGGAAATCA
ACAAGGACAAATTTCTAAAGAAAATCGGAAGAGAAGTCTTCGTCAATCTGGGAAAACAGTCCTTCATATCTTGGAATCTT
CTAGTCAAGAGTCGGTGCTGAAGAGAAGGAGAGTTAGTGAACCAAATGAACATACCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 0 .00 RPM |
| SRP017611_kidney | 0 .21 RPM |
| SRP017611_brain | 0 .22 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000000071 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000143452 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000028109 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000005640 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000006025 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_1772 | 90.76 | 79.59 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000021160 retrocopies