Parental gene: | Slc25a39, ENSRNOG00000020994 |
| Aliases: | Slc25a39, RGD1306193 |
| Description: | Solute carrier family 25 member 39 [Source:UniProtKB/Swiss-Prot;Acc:Q4V8K4] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 10:90140264..90144607(-) |
>ENSRNOG00000020994
ATGGATGATCAGGATCCTGGGGGCATTAGCCCCCTTCAGCAGATGGTGGCCTCAGGAGCTGGGGCTGTGGTCACCTCCCT
CTTCATGACACCCCTGGATGTGGTGAAGGTCCGCCTTCAGTCTCAGAGACCCACGGTAGCCAGCGAATTGACAACTCCCT
CCAGATTCTGGAGTCTTTCCTACACCAAATCACCCTCCACTCTACAGTCCCCAGGGAAGTGCCTCCTGTACTGCAATGGT
GTCCTGGAGCCCCTGTACCTGTGCCCAAATGGTACTCGCTGCGCCACCTGGTTTCAGGATCCTACACGGTTCACTGGCAC
CTTGGATGCCTTTGTGAAGATTGTGAGGCATGAGGGCACCAGGACCCTGTGGAGCGGCCTCCCAGCCACCCTGGTGATGA
CTGTACCAGCCACTGCCATCTACTTCACTGCTTATGACCAACTCAAGGCCTTCCTATGTGGTCAGTCCTTGACCTCTGAC
CTCTACGCACCAATGGTGGCTGGTGCCCTCGCCCGAATGGGCACTGTGACAGTGGTCAGCCCCTTGGAGCTTGTGCGGAC
CAAGCTGCAGGCACAGCATGTGTCATACCGCGAACTGGCTGCCTGTGTTCAAGCTGCAGTGGCTCAGGGTGGCTGGCGCT
CACTGTGGCTGGGCTGGGGTCCCACAGCTCTTCGAGATGTACCCTTCTCAGCTCTATACTGGTTCAACTATGAGCTGGTG
AAGAGCCAGCTGAATGGGCCAAGACAGAAAGAGCAGACATCTGTTGGCATCAGCTTTGTGGCTGGTGGCATCTCAGGAAT
GGTGGCTGCCACCCTTACCCTACCCTTCGATGTCGTGAAGACACAGCGACAAATGTCACTGGGAGCAGTGGAGGCTATGA
GAGTGAAGCCGCCAAGAGTTGACTCCACCTGGCTCCTGCTTCGGAGAATCCAGGCTGAATCTGGCACCAGGGGACTCTTT
GCAGGTTTCCTCCCCAGGATCATCAAGGCTGCGCCCTCCTGCGCCATCATGATCAGCACTTACGAGTTTGGCAAAAGCTT
CTTCCACAGGCTCAACCAGGAGCAGCCTCTGGGCCACTGA
ATGGATGATCAGGATCCTGGGGGCATTAGCCCCCTTCAGCAGATGGTGGCCTCAGGAGCTGGGGCTGTGGTCACCTCCCT
CTTCATGACACCCCTGGATGTGGTGAAGGTCCGCCTTCAGTCTCAGAGACCCACGGTAGCCAGCGAATTGACAACTCCCT
CCAGATTCTGGAGTCTTTCCTACACCAAATCACCCTCCACTCTACAGTCCCCAGGGAAGTGCCTCCTGTACTGCAATGGT
GTCCTGGAGCCCCTGTACCTGTGCCCAAATGGTACTCGCTGCGCCACCTGGTTTCAGGATCCTACACGGTTCACTGGCAC
CTTGGATGCCTTTGTGAAGATTGTGAGGCATGAGGGCACCAGGACCCTGTGGAGCGGCCTCCCAGCCACCCTGGTGATGA
CTGTACCAGCCACTGCCATCTACTTCACTGCTTATGACCAACTCAAGGCCTTCCTATGTGGTCAGTCCTTGACCTCTGAC
CTCTACGCACCAATGGTGGCTGGTGCCCTCGCCCGAATGGGCACTGTGACAGTGGTCAGCCCCTTGGAGCTTGTGCGGAC
CAAGCTGCAGGCACAGCATGTGTCATACCGCGAACTGGCTGCCTGTGTTCAAGCTGCAGTGGCTCAGGGTGGCTGGCGCT
CACTGTGGCTGGGCTGGGGTCCCACAGCTCTTCGAGATGTACCCTTCTCAGCTCTATACTGGTTCAACTATGAGCTGGTG
AAGAGCCAGCTGAATGGGCCAAGACAGAAAGAGCAGACATCTGTTGGCATCAGCTTTGTGGCTGGTGGCATCTCAGGAAT
GGTGGCTGCCACCCTTACCCTACCCTTCGATGTCGTGAAGACACAGCGACAAATGTCACTGGGAGCAGTGGAGGCTATGA
GAGTGAAGCCGCCAAGAGTTGACTCCACCTGGCTCCTGCTTCGGAGAATCCAGGCTGAATCTGGCACCAGGGGACTCTTT
GCAGGTTTCCTCCCCAGGATCATCAAGGCTGCGCCCTCCTGCGCCATCATGATCAGCACTTACGAGTTTGGCAAAAGCTT
CTTCCACAGGCTCAACCAGGAGCAGCCTCTGGGCCACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 116 .86 RPM |
| SRP017611_kidney | 250 .31 RPM |
| SRP017611_brain | 29 .33 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000008556 | ortholog_one2many | 1 retrogene | |
| Echinops telfairi | ENSETEG00000002713 | ortholog_many2many | 1 retrogene | |
| Homo sapiens | ENSG00000013306 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000001925 | ortholog_many2many | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000011561 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000008333 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000009272 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000004189 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_1892 | 84.95 | 51.53 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_2884 | 79.57 | 63.51 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000020994 retrocopies