Parental gene: | Tial1, ENSRNOG00000020271 |
| Aliases: | None |
| Description: | nucleolysin TIAR [Source:RefSeq peptide;Acc:NP_001013211] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 1:206892010..206913052(-) |
>ENSRNOG00000020271
ATGATGGAAGACGACGGACAGCCCCGGACTCTATACGTAGGTAACCTCTCCAGAGATGTGACAGAAGTCCTTATCCTTCA
GTTATTCAGTCAGATCGGACCCTGTAAAAGCTGTAAAATGATAACAGAGCAACCCGATAGCAGAAGGGTCAACTCTTCTG
TTGGATTTTCTGTTTTGCAGCATACAAGCAATGACCCATATTGCTTTGTGGAATTTTATGAACACAGAGATGCAGCTGCT
GCATTAGCTGCTATGAATGGGAGAAAAATTTTGGGAAAGGAGGTCAAAGTAAACTGGGCAACAACACCAAGTAGCCAGAA
AAAAGACACTTCCAATCACTTCCATGTGTTTGTTGGGGATTTGAGTCCAGAAATTACAACAGAAGATATCAAGTCAGCAT
TTGCCCCCTTTGGTAAAATATCGGATGCCCGGGTAGTTAAAGATATGGCAACTGGAAAGTCCAAAGGCTATGGTTTTGTA
TCTTTTTATAACAAACTGGATGCAGAGAATGCAATTGTGCATATGGGGGGTCAGTGGTTGGGAGGTCGACAAATCAGAAC
CAATTGGGCCACACGTAAACCACCTGCCCCTAAAAGTACACAAGAAACTAACACTAAGCAGTTGAGATTTGAAGATGTAG
TAAACCAGTCAAGTCCAAAAAACTGCACTGTGTACTGTGGGGGGATCGCTTCGGGGCTGACAGATCAACTTATGAGACAA
ACATTTTCACCATTTGGACAAATTATGGAGATAAGAGTTTTTCCAGAGAAGGGGTATTCGTTTGTCAGATTTTCAACTCA
TGAAAGTGCAGCCCATGCTATTGTTTCTGTGAACGGTACTACAATCGAAGGACATGTGGTTAAATGCTATTGGGGTAAAG
AATCTCCTGATATGACTAAAAACTTCCAACAGGTTGACTACAGTCAGTGGGGCCAATGGAGCCAAGTGTATGGAAACCCA
CAACAGTACGGACAGTATATGGCAAATGGGTGGCAAGTACCTCCCTATGGAGTATATGGGCAGCCATGGAACCAACAAGG
ATTTGGAGTAGATCAATCACCTTCTGCTGCTTGGATGGGTGGATTTGGTGCTCAGCCTCCACAAGGACAAGCTCCGCCCC
CTGTCATACCTCCTCCAAACCAAGCTGGGTATGGAATGGCAAGTTTCCCAACACAGTGA
ATGATGGAAGACGACGGACAGCCCCGGACTCTATACGTAGGTAACCTCTCCAGAGATGTGACAGAAGTCCTTATCCTTCA
GTTATTCAGTCAGATCGGACCCTGTAAAAGCTGTAAAATGATAACAGAGCAACCCGATAGCAGAAGGGTCAACTCTTCTG
TTGGATTTTCTGTTTTGCAGCATACAAGCAATGACCCATATTGCTTTGTGGAATTTTATGAACACAGAGATGCAGCTGCT
GCATTAGCTGCTATGAATGGGAGAAAAATTTTGGGAAAGGAGGTCAAAGTAAACTGGGCAACAACACCAAGTAGCCAGAA
AAAAGACACTTCCAATCACTTCCATGTGTTTGTTGGGGATTTGAGTCCAGAAATTACAACAGAAGATATCAAGTCAGCAT
TTGCCCCCTTTGGTAAAATATCGGATGCCCGGGTAGTTAAAGATATGGCAACTGGAAAGTCCAAAGGCTATGGTTTTGTA
TCTTTTTATAACAAACTGGATGCAGAGAATGCAATTGTGCATATGGGGGGTCAGTGGTTGGGAGGTCGACAAATCAGAAC
CAATTGGGCCACACGTAAACCACCTGCCCCTAAAAGTACACAAGAAACTAACACTAAGCAGTTGAGATTTGAAGATGTAG
TAAACCAGTCAAGTCCAAAAAACTGCACTGTGTACTGTGGGGGGATCGCTTCGGGGCTGACAGATCAACTTATGAGACAA
ACATTTTCACCATTTGGACAAATTATGGAGATAAGAGTTTTTCCAGAGAAGGGGTATTCGTTTGTCAGATTTTCAACTCA
TGAAAGTGCAGCCCATGCTATTGTTTCTGTGAACGGTACTACAATCGAAGGACATGTGGTTAAATGCTATTGGGGTAAAG
AATCTCCTGATATGACTAAAAACTTCCAACAGGTTGACTACAGTCAGTGGGGCCAATGGAGCCAAGTGTATGGAAACCCA
CAACAGTACGGACAGTATATGGCAAATGGGTGGCAAGTACCTCCCTATGGAGTATATGGGCAGCCATGGAACCAACAAGG
ATTTGGAGTAGATCAATCACCTTCTGCTGCTTGGATGGGTGGATTTGGTGCTCAGCCTCCACAAGGACAAGCTCCGCCCC
CTGTCATACCTCCTCCAAACCAAGCTGGGTATGGAATGGCAAGTTTCCCAACACAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 26 .49 RPM |
| SRP017611_kidney | 30 .22 RPM |
| SRP017611_brain | 50 .90 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000009888 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000003783 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000010685 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_2547 | 75.10 | 65.05 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000020271 retrocopies