Parental gene:

Etf1, ENSRNOG00000019450

Aliases:None
Description:Eukaryotic peptide chain release factor subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q5U2Q7]
Organism:Rat (Rattus norvegicus)
Coordinates:18:27409449..27436622(-)


>ENSRNOG00000019450
ATGGCGGACGACCCCAGTGCTGCCGATAGGAACGTGGAGATCTGGAAGATCAAGAAGCTCATTAAGAGCTTGGAGGCGGC
CCGCGGCAATGGCACGAGCATGATATCACTGATCATTCCTCCCAAAGACCAGATTTCACGAGTGGCAAAAATGTTAGCAG
ATGAGTTTGGAACTGCGTCTAACATTAAGTCACGAGTAAACCGCCTTTCAGTCCTGGGAGCCATCACATCTGTACAACAG
AGACTCAAACTTTATAACAAAGTACCTCCAAATGGTCTGGTTGTTTACTGTGGAACAATTGTAACAGAAGAAGGAAAGGA
AAAGAAAGTTAACATTGACTTTGAACCTTTCAAACCAATTAACACATCATTGTATTTGTGCGACAACAAGTTTCATACAG
AGGCTCTTACAGCGTTACTCTCAGATGACAGCAAGTTTGGTTTTATTGTAATAGACGGCAGTGGTGCTCTTTTTGGCACG
CTCCAAGGAAACACCAGAGAAGTCCTGCACAAATTCACTGTGGATCTCCCAAAGAAACACGGCAGAGGAGGTCAATCAGC
CTTGCGTTTTGCCCGTTTAAGAATGGAAAAGCGACATAACTATGTTCGGAAAGTAGCAGAGACTGCTGTGCAGCTGTTTA
TTTCTGGAGACAAAGTGAATGTGGCTGGTTTGGTTTTAGCCGGATCAGCTGACTTTAAAACTGAACTAAGTCAATCTGAC
ATGTTTGACCAGAGGTTGCAATCTAAAGTTTTAAAATTAGTTGATATATCCTACGGTGGTGAAAATGGATTCAACCAAGC
TATTGAATTGTCTACTGAAGTTCTCTCCAACGTGAAGTTCATTCAAGAGAAGAAATTAATAGGACGATACTTTGATGAAA
TTAGCCAGGACACGGGCAAGTACTGTTTTGGAGTTGAAGACACACTGAAGGCTTTGGAAATGGGAGCTGTAGAGATTCTA
ATAGTCTATGAAAATCTGGATATAATGAGATACGTGCTTCATTGCCAAGGCACAGAAGAGGAGAAAATTCTCTATTTAAC
GCCAGAACAAGAGAAGGATAAATCTCACTTCACAGACAAAGAGACTGGACAGGAACATGAGCTGATAGAGAGCATGCCCC
TCTTGGAATGGTTTGCTAACAACTATAAAAAATTTGGAGCTACACTAGAAATTGTCACAGATAAGTCACAAGAAGGATCA
CAGTTTGTGAAAGGATTTGGTGGAATTGGAGGTATCTTGCGGTACCGAGTAGATTTCCAGGGAATGGAATACCAAGGAGG
AGATGACGAATTTTTTGACCTTGATGACTACTAG

Library Parental gene expression (RPM)
SRP017611_liver 54 .46 RPM
SRP017611_kidney 72 .43 RPM
SRP017611_brain 44 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000001282 ortholog_one2many 1 retrogene
retro_cfam_99,
Callithrix jacchus ENSCJAG00000006776 ortholog_one2one 2 retrogenes
retro_cjac_2316, retro_cjac_4133,
Dasypus novemcinctus ENSDNOG00000010830 ortholog_one2one 3 retrogenes
retro_dnov_1925, retro_dnov_2504, retro_dnov_610,
Equus caballus ENSECAG00000013041 ortholog_one2one 1 retrogene
retro_ecab_740,
Echinops telfairi ENSETEG00000007362 ortholog_one2one 2 retrogenes
retro_etel_1237, retro_etel_1400,
Gorilla gorilla ENSGGOG00000000657 ortholog_one2one 4 retrogenes
retro_ggor_2326, retro_ggor_2561, retro_ggor_2562, retro_ggor_2919,
Macaca mulatta ENSMMUG00000005871 ortholog_one2many 2 retrogenes
retro_mmul_1658, retro_mmul_718,
Mustela putorius furo ENSMPUG00000009338 ortholog_one2one 1 retrogene
retro_mputfur_1448,
Oryctolagus cuniculus ENSOCUG00000006650 ortholog_one2many 3 retrogenes
retro_ocun_1188, retro_ocun_1614, retro_ocun_462,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_2935 92.31 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSRNOG00000019450 retrocopies