Parental gene: | Dmap1, ENSRNOG00000019407 |
| Aliases: | None |
| Description: | DNA methyltransferase 1-associated protein 1 [Source:RefSeq peptide;Acc:NP_001015006] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 5:140323214..140331218(-) |
>ENSRNOG00000019407
ATGGCTACGGGCGCAGATGTACGAGACATTCTAGAACTCGGGGGTCCAGAGGGAGATGCCGCTTCTGGGACCATCAGCAA
AAAGGATATTATCAACCCGGACAAGAAAAAGTCCAAGAAGTCCTCAGAGACACTGACCTTCAAGAGGCCGGAGGGCATGC
ATCGGGAGGTCTATGCTTTGCTTTACTCTGACAAAAAGGACGCACCCCCACTGCTTCCCAGTGACACCGGTCAGGGGTAC
CGGACAGTGAAGGCTAAGTTGGGGTCCAAGAAGGTCCGACCTTGGAAGTGGATGCCATTTACCAACCCAGCTCGAAAGGA
TGGTGCTATGTTTTTCCACTGGCGCCGAGCAGCGGAGGAGGGCAAGGACTACCCTTTCGCCAGGTTCAATAAGACAGTAC
AGGTGCCGGTGTACTCAGAGCAGGAGTACCAGCTCTACCTTCACGATGATGCATGGACTAAGGCAGAGACTGACCATCTC
TTTGACCTCAGCCGCCGATTTGATTTGCGCTTCGTAGTTATTCACGATCGGTATGACCACCAGCAGTACAAGAAGCGTTC
TGTGGAGGACCTGAAAGAGAGGTACTACCACATTTGTGCTAAGCTTGCCAACGTGAGGGCTGTGCCAGGTACAGATCTCA
AAATACCAGTATTTGATGCTGGACATGAGAGACGGCGGAAGGAACAGCTGGAGAGACTTTACAACCGAACCCCAGAGCAG
GTGGCAGAGGAGGAGTACCTGCTCCAGGAGCTTCGTAAGATTGAGGCCCGGAAAAAAGAGCGGGAGAAGCGCAGCCAAGA
CCTGCAGAAGCTGATTACCGCAGCAGACACCACCGCAGAGCAGCGGCGCACAGAACGCAAGGCTCCCAAGAAGAAGCTAC
CCCAGAAGAAGGAGGCCGAGAAGCCGGCTGTTCCTGAGACTGCGGGCATCAAGTTCCCAGACTTTAAGTCAGCGGGTGTG
ACATTACGGAGCCAGCGGATGAAGCTGCCCAGCTCTGTGGGTCAGAAGAAGATCAAGGCGCTGGAACAGATGCTGCTGGA
ACTTGGTGTGGAGCTGAGCCCTACGCCCACAGAGGAGCTGGTGCATATGTTCAATGAGTTGCGGAGTGACCTGGTGTTAC
TCTACGAGCTCAAGCAGGCCTGTGCCAACTGTGAATATGAGCTGCAGATGCTACGGCACCGGCATGAGGCTCTGGCTCGG
GCAGGAGTGCTGGGGGGCCCTGCCACACCAGCAGTGGGACCAACCCCAGCGTCTGCTGAGCCAACAGTGTCTGAATCTGG
ACTTGGTCTTGACCCTAGCAAGGACACCATCATTGATGTCGTGGGTGCACCGCTCACACCCAATTCGCGGAAACGACGGG
AATCAGCCTCCAGCTCATCTTCTGTGAAGAAAGCCAAGAAACCATAA
ATGGCTACGGGCGCAGATGTACGAGACATTCTAGAACTCGGGGGTCCAGAGGGAGATGCCGCTTCTGGGACCATCAGCAA
AAAGGATATTATCAACCCGGACAAGAAAAAGTCCAAGAAGTCCTCAGAGACACTGACCTTCAAGAGGCCGGAGGGCATGC
ATCGGGAGGTCTATGCTTTGCTTTACTCTGACAAAAAGGACGCACCCCCACTGCTTCCCAGTGACACCGGTCAGGGGTAC
CGGACAGTGAAGGCTAAGTTGGGGTCCAAGAAGGTCCGACCTTGGAAGTGGATGCCATTTACCAACCCAGCTCGAAAGGA
TGGTGCTATGTTTTTCCACTGGCGCCGAGCAGCGGAGGAGGGCAAGGACTACCCTTTCGCCAGGTTCAATAAGACAGTAC
AGGTGCCGGTGTACTCAGAGCAGGAGTACCAGCTCTACCTTCACGATGATGCATGGACTAAGGCAGAGACTGACCATCTC
TTTGACCTCAGCCGCCGATTTGATTTGCGCTTCGTAGTTATTCACGATCGGTATGACCACCAGCAGTACAAGAAGCGTTC
TGTGGAGGACCTGAAAGAGAGGTACTACCACATTTGTGCTAAGCTTGCCAACGTGAGGGCTGTGCCAGGTACAGATCTCA
AAATACCAGTATTTGATGCTGGACATGAGAGACGGCGGAAGGAACAGCTGGAGAGACTTTACAACCGAACCCCAGAGCAG
GTGGCAGAGGAGGAGTACCTGCTCCAGGAGCTTCGTAAGATTGAGGCCCGGAAAAAAGAGCGGGAGAAGCGCAGCCAAGA
CCTGCAGAAGCTGATTACCGCAGCAGACACCACCGCAGAGCAGCGGCGCACAGAACGCAAGGCTCCCAAGAAGAAGCTAC
CCCAGAAGAAGGAGGCCGAGAAGCCGGCTGTTCCTGAGACTGCGGGCATCAAGTTCCCAGACTTTAAGTCAGCGGGTGTG
ACATTACGGAGCCAGCGGATGAAGCTGCCCAGCTCTGTGGGTCAGAAGAAGATCAAGGCGCTGGAACAGATGCTGCTGGA
ACTTGGTGTGGAGCTGAGCCCTACGCCCACAGAGGAGCTGGTGCATATGTTCAATGAGTTGCGGAGTGACCTGGTGTTAC
TCTACGAGCTCAAGCAGGCCTGTGCCAACTGTGAATATGAGCTGCAGATGCTACGGCACCGGCATGAGGCTCTGGCTCGG
GCAGGAGTGCTGGGGGGCCCTGCCACACCAGCAGTGGGACCAACCCCAGCGTCTGCTGAGCCAACAGTGTCTGAATCTGG
ACTTGGTCTTGACCCTAGCAAGGACACCATCATTGATGTCGTGGGTGCACCGCTCACACCCAATTCGCGGAAACGACGGG
AATCAGCCTCCAGCTCATCTTCTGTGAAGAAAGCCAAGAAACCATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 8 .61 RPM |
| SRP017611_kidney | 12 .56 RPM |
| SRP017611_brain | 19 .27 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000003922 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000009640 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_2428 | 75.61 | 69.44 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_2504 | 78.22 | 69.44 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_rnor_2507 | 78.22 | 69.44 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_rnor_2940 | 95.74 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000019407 retrocopies