Parental gene: | Stmn1, ENSRNOG00000016810 |
| Aliases: | Stmn1, Lap18, OP18, PP17, PP19, PR22, SMN, prosolin |
| Description: | Stathmin [Source:UniProtKB/Swiss-Prot;Acc:P13668] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 5:156466728..156472404(+) |
>ENSRNOG00000016810
ATGGCATCTTCTGATATTCAGGTGAAAGAGCTGGAGAAGCGTGCTTCCGGCCAGGCTTTTGAGCTGATTCTCAGCCCTCG
ATCAAAAGAATCTGTCCCCGAGTTCCCCCTTTCCCCCCCAAAGAAGAAGGATCTTTCCCTGGAGGAAATTCAGAAGAAAT
TAGAAGCTGCAGAAGAAAGACGCAAGTCTCATGAAGCAGAAGTCTTGAAGCAGCTCGCTGAGAAGCGGGAGCATGAAAAA
GAAGTGCTCCAGAAAGCCATTGAGGAGAACAACAACTTCAGCAAAATGGCAGAGGAGAAACTGACCCACAAAATGGAGGC
TAACAAAGAGAACCGGGAGGCGCAAATGGCTGCCAAGCTGGAGCGTTTGCGAGAGAAGGACAAGCACGTTGAAGAGGTGC
GGAAGAACAAAGAATCCAAAGACCCCGCGGACGAGACCGAGGCTGACTAA
ATGGCATCTTCTGATATTCAGGTGAAAGAGCTGGAGAAGCGTGCTTCCGGCCAGGCTTTTGAGCTGATTCTCAGCCCTCG
ATCAAAAGAATCTGTCCCCGAGTTCCCCCTTTCCCCCCCAAAGAAGAAGGATCTTTCCCTGGAGGAAATTCAGAAGAAAT
TAGAAGCTGCAGAAGAAAGACGCAAGTCTCATGAAGCAGAAGTCTTGAAGCAGCTCGCTGAGAAGCGGGAGCATGAAAAA
GAAGTGCTCCAGAAAGCCATTGAGGAGAACAACAACTTCAGCAAAATGGCAGAGGAGAAACTGACCCACAAAATGGAGGC
TAACAAAGAGAACCGGGAGGCGCAAATGGCTGCCAAGCTGGAGCGTTTGCGAGAGAAGGACAAGCACGTTGAAGAGGTGC
GGAAGAACAAAGAATCCAAAGACCCCGCGGACGAGACCGAGGCTGACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 1 .95 RPM |
| SRP017611_kidney | 46 .20 RPM |
| SRP017611_brain | 331 .66 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000013761 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000009462 | ortholog_one2many | 2 retrogenes | |
| Equus caballus | ENSECAG00000021662 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000006089 | possible_ortholog | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000015774 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000006493 | possible_ortholog | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000006344 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000011057 | ortholog_one2one | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000006382 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_765 | 88.08 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_1604 | 66.00 | 66.44 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_rnor_1855 | 75.54 | 90.60 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_rnor_2048 | 74.83 | 97.32 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000016810 retrocopies