Parental gene: | Ppp6c, ENSRNOG00000015145 |
| Aliases: | None |
| Description: | Serine/threonine-protein phosphatase 6 catalytic subunit [Source:UniProtKB/Swiss-Prot;Acc:Q64620] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 3:28702127..28732821(-) |
>ENSRNOG00000015145
ATGGCGCCACTGGATCTGGACAAGTATGTGGAGATAGCGCGGCAGTGCAAGTACCTTCCCGAAAACGACCTGAAGCGGCT
ATGTGACTATGTTTGTGATCTGCTCTTGGAAGAGTCGAATGTTCAGCCTGTATCAACGCCAGTAACAGTGTGCGGGGACA
TACATGGACAGTTTTATGATCTTTGCGAACTGTTCAGAACTGGAGGTCAGGTTCCTGACACAAACTACATATTTATGGGT
GATTTTGTAGACAGAGGTTACTATAGTTTGGAGACCTTCACTTATCTTCTTGCACTAAAGGCTAAGTGGCCTGACCGTAT
TACACTTTTAAGAGGAAATCATGAGAGTAGACAGATAACGCAGGTGTACGGATTTTATGATGAGTGCCAAACCAAATATG
GAAATGCTAATGCCTGGAGATACTGTACCAAAGTTTTTGACATGCTCACAGTAGCAGCTTTAATAGATGAGCAGATTTTG
TGTGTTCATGGTGGTTTATCTCCTGATATCAAAACACTGGATCAAATTCGAACTATTGAGCGAAATCAGGAAATTCCTCA
CAAAGGAGCATTTTGTGACCTGGTATGGTCAGATCCTGAAGATGTGGACACTTGGGCAATCAGTCCCAGAGGAGCAGGTT
GGCTTTTTGGAGCAAAAGTCACAAATGAGTTTGTTCATATCAACAACTTAAAACTCATCTGCAGAGCACATCAGCTTGTG
CACGAAGGCTATAAGTTTATGTTTGACGAGAAGCTGGTCACAGTGTGGTCTGCTCCTAACTACTGCTATCGCTGTGGAAA
CATTGCTTCCATCATGGTCTTCAAAGACGTCAACACGAGAGAACCAAAGTTATTCCGAGCAGTTCCAGATTCAGAACGTG
TTATTCCTCCCAGAACCACGACGCCGTATTTCCTTTGA
ATGGCGCCACTGGATCTGGACAAGTATGTGGAGATAGCGCGGCAGTGCAAGTACCTTCCCGAAAACGACCTGAAGCGGCT
ATGTGACTATGTTTGTGATCTGCTCTTGGAAGAGTCGAATGTTCAGCCTGTATCAACGCCAGTAACAGTGTGCGGGGACA
TACATGGACAGTTTTATGATCTTTGCGAACTGTTCAGAACTGGAGGTCAGGTTCCTGACACAAACTACATATTTATGGGT
GATTTTGTAGACAGAGGTTACTATAGTTTGGAGACCTTCACTTATCTTCTTGCACTAAAGGCTAAGTGGCCTGACCGTAT
TACACTTTTAAGAGGAAATCATGAGAGTAGACAGATAACGCAGGTGTACGGATTTTATGATGAGTGCCAAACCAAATATG
GAAATGCTAATGCCTGGAGATACTGTACCAAAGTTTTTGACATGCTCACAGTAGCAGCTTTAATAGATGAGCAGATTTTG
TGTGTTCATGGTGGTTTATCTCCTGATATCAAAACACTGGATCAAATTCGAACTATTGAGCGAAATCAGGAAATTCCTCA
CAAAGGAGCATTTTGTGACCTGGTATGGTCAGATCCTGAAGATGTGGACACTTGGGCAATCAGTCCCAGAGGAGCAGGTT
GGCTTTTTGGAGCAAAAGTCACAAATGAGTTTGTTCATATCAACAACTTAAAACTCATCTGCAGAGCACATCAGCTTGTG
CACGAAGGCTATAAGTTTATGTTTGACGAGAAGCTGGTCACAGTGTGGTCTGCTCCTAACTACTGCTATCGCTGTGGAAA
CATTGCTTCCATCATGGTCTTCAAAGACGTCAACACGAGAGAACCAAAGTTATTCCGAGCAGTTCCAGATTCAGAACGTG
TTATTCCTCCCAGAACCACGACGCCGTATTTCCTTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 21 .52 RPM |
| SRP017611_kidney | 46 .20 RPM |
| SRP017611_brain | 29 .98 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000012357 | ortholog_one2one | 3 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000015319 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000010197 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000020549 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000008282 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000005600 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_2074 | 65.02 | 65.25 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000015145 retrocopies