Parental gene:

Ddi2, ENSRNOG00000012274

Aliases:Ddi2, RGD1311815
Description:protein DDI1 homolog 2 [Source:RefSeq peptide;Acc:NP_001029321]
Organism:Rat (Rattus norvegicus)
Coordinates:5:163951351..163995207(-)


>ENSRNOG00000012274
ATGCTGCTCACCGTGTACTGTGTGCGGAGGGACCTCTCCGAGGTGACCTTTTCCCTCCAGGTCGACGCCGACTTCGAGCT
GCACAACTTCCGCGCGCTGTGCGAGCTCGAGTCCGGGATCCCTGCCGCCGAGAGCCAGATTGTCTACGCAGAAAGACCTC
TCACGGACAACCACAGGTCACTGGCTTCTTACGGTTTAAAAGATGGCGATGTTGTAATTCTGCGACAGAAGGAGAATGCA
GACCCTCGCCCTTCAGTGCAGTTCTCAAACTTACCCCGGATTGACTTCAGTAGCATAGCTGTGCCTGGTACGTCAAACCC
CCAACAGCGCCAGCTGCCCAGGACACAGGCTCAGCTCTTGTCTCCTGGGGAGAGAACATCGACTCCTCAGGGTTTAGACA
GCCCAGCCCTGCTCCGAGACATGCTGCTGGCCAACCCACATGAGTTGTCCTTGCTGAAGGAGCGCAACCCACCCTTGGCA
GAAGCTCTGCTCAGCGGTGATCTTGAAAAATTCTCTAGGGTCCTGGTGGAGCAGCAGCAGGACCGAGCCCGGAGAGAACA
AGAACGCATTCGTCTGTTTTCTGCTGACCCCTTTGATCTTGAAGCTCAGGCAAAGATAGAAGAAGACATAAGGCAGCAGA
ACATCGAGGAGAACATGACCATAGCTATGGAGGAGGCCCCGGAGAGCTTTGGGCAGGTCGCCATGCTCTACATCAACTGC
AGAGTGAACGGGCATCCTGTGAAAGCCTTCGTTGACTCAGGTGCCCAGATGACTATTATGAGCCAGGCCTGTGCAGAAAG
GTGTAACATTATGAGACTGGTGGACCGTCGGTGGGCTGGCATTGCCAAAGGAGTGGGCACGCAGAAGATTATTGGAAGGG
TGCATCTAGGTTCAGATTGA

Library Parental gene expression (RPM)
SRP017611_liver 124 .86 RPM
SRP017611_kidney 73 .69 RPM
SRP017611_brain 32 .35 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011873 ortholog_one2one 1 retrogene
retro_amel_10,
Bos taurus ENSBTAG00000018718 ortholog_one2one 2 retrogenes
retro_btau_15, retro_btau_650,
Canis familiaris ENSCAFG00000016220 ortholog_one2one 1 retrogene
retro_cfam_193,
Callithrix jacchus ENSCJAG00000008625 ortholog_one2one 1 retrogene
retro_cjac_196,
Cavia porcellus ENSCPOG00000020885 ortholog_one2one 1 retrogene
retro_cpor_88,
Equus caballus ENSECAG00000000762 ortholog_one2one 1 retrogene
retro_ecab_110,
Homo sapiens ENSG00000197312 ortholog_one2one 1 retrogene
retro_hsap_96,
Gorilla gorilla ENSGGOG00000013537 ortholog_one2one 1 retrogene
retro_ggor_143,
Macropus eugenii ENSMEUG00000006148 ortholog_one2one 1 retrogene
retro_meug_1364,
Myotis lucifugus ENSMLUG00000030669 ortholog_one2one 1 retrogene
retro_mluc_68,
Macaca mulatta ENSMMUG00000019912 ortholog_one2one 1 retrogene
retro_mmul_231,
Monodelphis domestica ENSMODG00000003515 ortholog_one2one 1 retrogene
retro_mdom_282,
Mustela putorius furo ENSMPUG00000016332 ortholog_one2one 1 retrogene
retro_mputfur_1509,
Mus musculus ENSMUSG00000078515 ortholog_one2one 1 retrogene
retro_mmus_67,
Oryctolagus cuniculus ENSOCUG00000023891 ortholog_one2one 1 retrogene
retro_ocun_249,
Otolemur garnettii ENSOGAG00000027709 ortholog_one2one 1 retrogene
retro_ogar_4,
Ochotona princeps ENSOPRG00000018448 ortholog_one2one 1 retrogene
retro_opri_4,
Pongo abelii ENSPPYG00000001841 ortholog_one2one 1 retrogene
retro_pabe_158,
Pan troglodytes ENSPTRG00000024059 ortholog_one2one 1 retrogene
retro_ptro_570,
Pteropus vampyrus ENSPVAG00000005084 ortholog_one2one 1 retrogene
retro_pvam_420,
Sus scrofa ENSSSCG00000003462 ortholog_one2one 1 retrogene
retro_sscr_6,
Ictidomys tridecemlineatus ENSSTOG00000019447 ortholog_one2one 1 retrogene
retro_itri_93,
Tarsius syrichta ENSTSYG00000002522 ortholog_one2one 1 retrogene
retro_tsyr_1120,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_2606 77.44 64.21
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Download FASTA sequences of all ENSRNOG00000012274 retrocopies