Parental gene: | Psmb7, ENSRNOG00000011732 |
| Aliases: | None |
| Description: | Proteasome subunit beta type-7 [Source:UniProtKB/Swiss-Prot;Acc:Q9JHW0] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 3:28115649..28176238(-) |
>ENSRNOG00000011732
ATGGCGGCTGTGTCGGTGTTTCAGGCACCGGTCGGAGGCTTTTCTTTTGATAATTGCCGCAGGAATGCGGTCTTGGAAGC
TGATTTTGCAAAAAAGGGGTTCAAACTTCCGAAAGCTCGGAAAACTGGCACTACCATCGCGGGGGTGGTCTATAAGGATG
GAATAGTTCTTGGAGCAGACACGAGAGCAACTGAAGGGATGGTTGTTGCTGACAAAAACTGTTCAAAAATTCACTTCATA
TCTCCTAATATTTATTGCTGTGGTGCTGGGACAGCTGCAGACACAGACATGACAACCCAGCTTATTTCTTCTAACTTGGA
GCTCCACTCTCTCACCACCGGCCGCCTTCCCAGAGTTGTCACAGCGAATCGGATGCTGAAGCAGATGCTTTTCAGGTATC
AAGGTTACATTGGTGCAGCCCTAGTTTTGGGGGGAGTCGATGTTACTGGACCTCATCTCTACAGCATCTATCCGCATGGA
TCAACTGATAAACTGCCTTATGTCACCATGGGTTCTGGCTCCTTGGCAGCAATGGCTGTGTTTGAAGATAAGTTTAGGCC
AGATATGGAGGAGGAAGAAGCCAAGAAGCTAGTGAGTGAAGCTATTGCAGCTGGCATCTTTAATGACTTGGGGTCTGGAA
GCAACATTGATCTGTGTGTTATCAGCAAGAGCAAGCTGGACTTTCTCCGTCCATACTCAGTGCCCAACAAGAAAGGGACC
AGGTTTGGCCGGTACAGGTGTGAGAAAGGCACTACCGCTGTCCTCACGGAGAAAGTCACCCCTCTGGAGCTCGAGGTGCT
AGAAGAGATTGTTCAGACAATGGACACTTCGTGA
ATGGCGGCTGTGTCGGTGTTTCAGGCACCGGTCGGAGGCTTTTCTTTTGATAATTGCCGCAGGAATGCGGTCTTGGAAGC
TGATTTTGCAAAAAAGGGGTTCAAACTTCCGAAAGCTCGGAAAACTGGCACTACCATCGCGGGGGTGGTCTATAAGGATG
GAATAGTTCTTGGAGCAGACACGAGAGCAACTGAAGGGATGGTTGTTGCTGACAAAAACTGTTCAAAAATTCACTTCATA
TCTCCTAATATTTATTGCTGTGGTGCTGGGACAGCTGCAGACACAGACATGACAACCCAGCTTATTTCTTCTAACTTGGA
GCTCCACTCTCTCACCACCGGCCGCCTTCCCAGAGTTGTCACAGCGAATCGGATGCTGAAGCAGATGCTTTTCAGGTATC
AAGGTTACATTGGTGCAGCCCTAGTTTTGGGGGGAGTCGATGTTACTGGACCTCATCTCTACAGCATCTATCCGCATGGA
TCAACTGATAAACTGCCTTATGTCACCATGGGTTCTGGCTCCTTGGCAGCAATGGCTGTGTTTGAAGATAAGTTTAGGCC
AGATATGGAGGAGGAAGAAGCCAAGAAGCTAGTGAGTGAAGCTATTGCAGCTGGCATCTTTAATGACTTGGGGTCTGGAA
GCAACATTGATCTGTGTGTTATCAGCAAGAGCAAGCTGGACTTTCTCCGTCCATACTCAGTGCCCAACAAGAAAGGGACC
AGGTTTGGCCGGTACAGGTGTGAGAAAGGCACTACCGCTGTCCTCACGGAGAAAGTCACCCCTCTGGAGCTCGAGGTGCT
AGAAGAGATTGTTCAGACAATGGACACTTCGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 50 .76 RPM |
| SRP017611_kidney | 60 .99 RPM |
| SRP017611_brain | 66 .86 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000003067 | ortholog_one2many | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000005432 | ortholog_one2many | 2 retrogenes | |
| Homo sapiens | ENSG00000136930 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000012164 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017268 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000003513 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000019596 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000021354 | ortholog_one2many | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000000204 | ortholog_one2many | 2 retrogenes | |
| Sorex araneus | ENSSARG00000009395 | ortholog_one2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000009196 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_1581 | 85.64 | 63.90 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_1582 | 85.64 | 63.90 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_rnor_2469 | 74.79 | 83.03 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000011732 retrocopies