Parental gene: | Rnf7, ENSRNOG00000011663 |
| Aliases: | None |
| Description: | RING-box protein 2 [Source:RefSeq peptide;Acc:NP_001100318] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 8:103774030..103783041(-) |
>ENSRNOG00000011663
ATGGCCGACGTGGAGGACGGCGAGGAACCCTGCGTCCTTTCCTCGCATTCTGGGAGCGCAGGCTCCAAGTCGGGAGGCGA
CAAGATGTTCTCCCTCAAGAAGTGGAACGCGGTAGCCATGTGGAGCTGGGACGTTGAGTGCGATACCTGCGCCATCTGCA
GGGTCCAGGTGATGGATGCCTGTCTTAGATGTCAAGCTGAAAACAAACAAGAGGACTGTGTTGTGGTCTGGGGAGAATGT
AACCACTCCTTCCACAACTGCTGCATGTCCCTGTGGGTGAAGCAGAACAACCGCTGCCCTCTGTGCCAGCAGGACTGGGT
GGTCCAAAGAATCGGCAAGTGA
ATGGCCGACGTGGAGGACGGCGAGGAACCCTGCGTCCTTTCCTCGCATTCTGGGAGCGCAGGCTCCAAGTCGGGAGGCGA
CAAGATGTTCTCCCTCAAGAAGTGGAACGCGGTAGCCATGTGGAGCTGGGACGTTGAGTGCGATACCTGCGCCATCTGCA
GGGTCCAGGTGATGGATGCCTGTCTTAGATGTCAAGCTGAAAACAAACAAGAGGACTGTGTTGTGGTCTGGGGAGAATGT
AACCACTCCTTCCACAACTGCTGCATGTCCCTGTGGGTGAAGCAGAACAACCGCTGCCCTCTGTGCCAGCAGGACTGGGT
GGTCCAAAGAATCGGCAAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 5 .24 RPM |
| SRP017611_kidney | 14 .44 RPM |
| SRP017611_brain | 6 .54 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000007694 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000010742 | ortholog_one2many | 3 retrogenes | |
| Callithrix jacchus | ENSCJAG00000001991 | ortholog_one2one | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000005961 | ortholog_one2one | 3 retrogenes | |
| Homo sapiens | ENSG00000114125 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000001829 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000001353 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000006648 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000021232 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000051234 | ortholog_one2many | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000004646 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000008659 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000014167 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000039248 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000019214 | within_species_paralog | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000014964 | ortholog_one2one | 3 retrogenes | |
| Tupaia belangeri | ENSTBEG00000002917 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000007778 | ortholog_one2one | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_517 | 76.53 | 86.73 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_624 | 73.04 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_rnor_1858 | 81.54 | 56.64 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_rnor_1859 | 81.54 | 56.64 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_rnor_2262 | 83.19 | 99.12 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000011663 retrocopies