Parental gene: | Ccdc47, ENSRNOG00000009006 |
| Aliases: | Ccdc47, RGD1308813 |
| Description: | Coiled-coil domain-containing protein 47 [Source:UniProtKB/Swiss-Prot;Acc:Q5U2X6] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 10:94139731..94158251(-) |
>ENSRNOG00000009006
ATGAAAGCCTTCTGTGCTTTCTGTGTTGTTCTCTTGGTGTTTGGGAGTGTCTCTGAAGCCAAGTTTGATGATTTCGAGGA
TGAGGAAGACATAGTAGAGTATGATGATAATGATTTTGCTGAGTTTGAGGACGTCGTGGAAGATTCTGTTACGGAATCTC
CTCAGCGAGTGATCAACACTGAAGATGACGAGGATGAGGCCACCGTGGAATTGGAAGGGCAGGATGAAGGCCAAGAAGGC
GATTTCGAAGATGCAGATACCCAGGAGGGAGATACAGAAAGTGAGCCATATGATGACGAAGAATTTGAGGGTTATGAAGA
CAAACCTGATACCTCTTCTAACAAAAATAAAGATCCAATAACAATTGTTGATGTTCCTGCACACCTCCAGAACAGTTGGG
AGAGTTATTACCTAGAAATTTTGATGGTGACCGGTCTGCTTGCCTATATCATGAACTATATCATCGGGAAGAATAAAAAC
AGCCGACTTGCTCAGGCCTGGTTTAACTCTCATAGAGAGCTTTTGGAGAGCAATTTTACCTTAGTGGGGGATGATGGGAC
TAACAAAGAAGCCACAAGCACAGGGAAGTTGAACCAGGAGAATGAGCACATCTATAACCTGTGGTGTTCTGGCCGAGTGT
GCTGTGAAGGCATGCTCATCCAGCTGAGGTTCCTGAAGAGACAAGACTTACTTAACGTCCTGGCCCGGATGATGAGGCCA
GTGAGTGATCAGGTGCAAATAAAAGTCACAATGAACGACGAGGACATGGATACATACGTGTTCGCTGTCGGCACTCGCAA
AGCTTTGCTGCGACTGCAGAAAGAGATGCAGGATCTGAGTGAGTTTTGTAGTGATAAACCTAAGTCTGGAGCGAAGTATG
GACTGCCAGACTCTTTGGCCATTCTGTCAGAGATGGGAGAAGTCACAGAGGGGATGATGGATACAAAGATGGTTCACTTT
CTTACACACTATGCTGATAAGATTGAATCTGTTCATTTTTCAGACCAGTTCTCTGGTCCAAAGATTATGCAAGAGGAAGG
GCAGCCTTTAAAGCTGCCTGACACCAAGAGGACACTACTGTTTACATTTAATGTGCCTGGCTCAGGTAACACGTACCCAA
AGGATATGGAGGCTTTGCTACCCCTGATGAACATGGTGATTTATTCTATCGATAAAGCCAAAAAGTTCCGCCTCAACAGA
GAAGGCAAACAAAAAGCAGATAAGAACCGGGCACGCGTGGAAGAGAACTTTCTGAAGCTGACACATGTACAGAGACAGGA
GGCTGCACAGTCTCGGCGTGAGGAGAAGAAAAGAGCTGAGAAGGAGCGGATCATGAATGAGGAGGACCCTGAAAAGCAGC
GCAGGCTGGAGGAAGCGGCTTTGAGGAGAGAACAAAAGAAGTTGGAGAAGAAGCAAATGAAAATGAAACAAATCAAAGTG
AAAGCCATGTAA
ATGAAAGCCTTCTGTGCTTTCTGTGTTGTTCTCTTGGTGTTTGGGAGTGTCTCTGAAGCCAAGTTTGATGATTTCGAGGA
TGAGGAAGACATAGTAGAGTATGATGATAATGATTTTGCTGAGTTTGAGGACGTCGTGGAAGATTCTGTTACGGAATCTC
CTCAGCGAGTGATCAACACTGAAGATGACGAGGATGAGGCCACCGTGGAATTGGAAGGGCAGGATGAAGGCCAAGAAGGC
GATTTCGAAGATGCAGATACCCAGGAGGGAGATACAGAAAGTGAGCCATATGATGACGAAGAATTTGAGGGTTATGAAGA
CAAACCTGATACCTCTTCTAACAAAAATAAAGATCCAATAACAATTGTTGATGTTCCTGCACACCTCCAGAACAGTTGGG
AGAGTTATTACCTAGAAATTTTGATGGTGACCGGTCTGCTTGCCTATATCATGAACTATATCATCGGGAAGAATAAAAAC
AGCCGACTTGCTCAGGCCTGGTTTAACTCTCATAGAGAGCTTTTGGAGAGCAATTTTACCTTAGTGGGGGATGATGGGAC
TAACAAAGAAGCCACAAGCACAGGGAAGTTGAACCAGGAGAATGAGCACATCTATAACCTGTGGTGTTCTGGCCGAGTGT
GCTGTGAAGGCATGCTCATCCAGCTGAGGTTCCTGAAGAGACAAGACTTACTTAACGTCCTGGCCCGGATGATGAGGCCA
GTGAGTGATCAGGTGCAAATAAAAGTCACAATGAACGACGAGGACATGGATACATACGTGTTCGCTGTCGGCACTCGCAA
AGCTTTGCTGCGACTGCAGAAAGAGATGCAGGATCTGAGTGAGTTTTGTAGTGATAAACCTAAGTCTGGAGCGAAGTATG
GACTGCCAGACTCTTTGGCCATTCTGTCAGAGATGGGAGAAGTCACAGAGGGGATGATGGATACAAAGATGGTTCACTTT
CTTACACACTATGCTGATAAGATTGAATCTGTTCATTTTTCAGACCAGTTCTCTGGTCCAAAGATTATGCAAGAGGAAGG
GCAGCCTTTAAAGCTGCCTGACACCAAGAGGACACTACTGTTTACATTTAATGTGCCTGGCTCAGGTAACACGTACCCAA
AGGATATGGAGGCTTTGCTACCCCTGATGAACATGGTGATTTATTCTATCGATAAAGCCAAAAAGTTCCGCCTCAACAGA
GAAGGCAAACAAAAAGCAGATAAGAACCGGGCACGCGTGGAAGAGAACTTTCTGAAGCTGACACATGTACAGAGACAGGA
GGCTGCACAGTCTCGGCGTGAGGAGAAGAAAAGAGCTGAGAAGGAGCGGATCATGAATGAGGAGGACCCTGAAAAGCAGC
GCAGGCTGGAGGAAGCGGCTTTGAGGAGAGAACAAAAGAAGTTGGAGAAGAAGCAAATGAAAATGAAACAAATCAAAGTG
AAAGCCATGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 86 .13 RPM |
| SRP017611_kidney | 143 .89 RPM |
| SRP017611_brain | 148 .18 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Otolemur garnettii | ENSOGAG00000006869 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000009955 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_2236 | 82.41 | 59.42 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000009006 retrocopies