Parental gene: | Mif, ENSRNOG00000006589 |
| Aliases: | None |
| Description: | Macrophage migration inhibitory factor [Source:UniProtKB/Swiss-Prot;Acc:P30904] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 20:15885247..15886113(+) |
>ENSRNOG00000006589
ATGCCTATGTTCATCGTGAACACCAATGTTCCCCGCGCCTCCGTGCCAGAGGGGTTTCTCTCCGAGCTCACCCAGCAGCT
GGCGCAGGCCACCGGCAAGCCGGCACAGTACATCGCAGTGCACGTGGTCCCGGACCAGCTCATGACTTTTAGTGGCACGA
GCGACCCCTGCGCCCTCTGCAGCCTGCACAGCATCGGCAAGATCGGTGGCGCCCAGAACCGCAACTACAGCAAGCTGCTG
TGCGGCCTGCTGTCCGATCGCCTGCACATCAGCCCGGACCGGGTCTACATCAACTATTACGACATGAACGCAGCCAACGT
GGGCTGGAACGGTTCCACCTTCGCTTGA
ATGCCTATGTTCATCGTGAACACCAATGTTCCCCGCGCCTCCGTGCCAGAGGGGTTTCTCTCCGAGCTCACCCAGCAGCT
GGCGCAGGCCACCGGCAAGCCGGCACAGTACATCGCAGTGCACGTGGTCCCGGACCAGCTCATGACTTTTAGTGGCACGA
GCGACCCCTGCGCCCTCTGCAGCCTGCACAGCATCGGCAAGATCGGTGGCGCCCAGAACCGCAACTACAGCAAGCTGCTG
TGCGGCCTGCTGTCCGATCGCCTGCACATCAGCCCGGACCGGGTCTACATCAACTATTACGACATGAACGCAGCCAACGT
GGGCTGGAACGGTTCCACCTTCGCTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 125 .80 RPM |
| SRP017611_kidney | 176 .48 RPM |
| SRP017611_brain | 82 .75 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000010668 | ortholog_many2many | 3 retrogenes | |
| Cavia porcellus | ENSCPOG00000013520 | ortholog_many2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000014555 | ortholog_many2many | 1 retrogene | |
| Equus caballus | ENSECAG00000012792 | ortholog_one2many | 1 retrogene | |
| Echinops telfairi | ENSETEG00000012052 | ortholog_many2many | 3 retrogenes | |
| Mus musculus | ENSMUSG00000033307 | ortholog_one2many | 8 retrogenes | |
| Ochotona princeps | ENSOPRG00000012184 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_31 | 66.97 | 93.91 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_137 | 95.65 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_rnor_361 | 87.37 | 82.61 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_rnor_1608 | 80.17 | 99.13 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_rnor_1644 | 75.96 | 89.57 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_rnor_2263 | 92.24 | 99.13 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000006589 retrocopies