Parental gene: | Fam149b1, ENSRNOG00000006554 |
| Aliases: | Fam149b1, RGD1359592 |
| Description: | Protein FAM149B1 [Source:UniProtKB/Swiss-Prot;Acc:Q5PQL8] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 15:8463359..8500617(-) |
>ENSRNOG00000006554
ATGGAACTTGACCAGAATGCCACTGAGAAAGTGAAGGCCATGTTCACGGCCATTGATGAGCTCCTGTATGAACAGAAGCC
GAGCGTGCACACACAGAGCCTGCAGAAAGAGTGCCAGCAGTGGGCGTCCAGCTTCCCTCACCTCAGGATTCTGGGTAGGC
AGATAATCACTTCGAGTGAAGGCTATGGATTGTACCCTAGATCCCCTTCTGCTGTGTCAGCTTCACATGAAGCAATCTTG
CCTCAAGAAAGAGAGTCTACCATATTTGGTATAAGGGGAAAGAAGTTACACTTTTCATCGTCTTACAAAGCATCTCCCAG
CACCAAAGCCTCTGGCTCGTCTGCTGATGGAGAGGAGGCGGACTGTATAATCTTCTCTGAAGGAATAATCGAGGAGTACC
TAGCTTTTGACCACACAGATATGGAAGAGGGATTTCATGGAAACAAATCAGAAGCAGCTACAGAGAAACAGAAGTTAGGG
TACCCTCCCATTGCACCATTTTACTGCATGAAAGAGGATGTTCTTGCTTATGTGTTTGACAACGTGTGGAGCAAGGCTGT
GGGCTGTATGGAGCAGTTGACACGTAGTCACTGGGAGGGATTTGCTTCTGATGATGAGAGTAACGTTGAAATTACCAGAC
TGGATTCGGGAAGTCCCTATATGCTGAACGAACAGCAGCCTTTGGTCTTACCTCGAGTGCCGCAGTCTAAGGTGATGTCA
GTCACCTCAAATCCGATGAATTTCTGTCAAGCAAGTGGTCATCAGCCAAACGTGAATGGCCTCTTGATTCATGGGATGCC
TCTACAGCCAAGGAATCTCTCCCTGATGGATAAGCTCCTAGATCTTGATGACAAGCTCCTCATGAGGCCTGGGTCCAGTT
CCGTCCTTTCAAACCGAAATTGGCCAAACCGAGCCATGGAGCTCAGTACATCATCCTTGTCATATACAACGCAGTCTGCC
AGGAGGCGCAACCCCCCACCACGCACCCTTCATCCGATCAGCACGAGCCACTCACGCACTGGAACACCGTGGCCTGCAGA
AGAAATCCTCAGAGGACCCCGGCTTCCGATGACAGCAGACTCACTCTCTTCTCCCTCACCAATGACCATGGGTCGGAACA
ACCTGCTGCCACCTATTGGAACAGCTGATGTAGAGCACCTGAGCATCCTGGGGTCCCAACGGCCAACAAAACCCCACGGT
GATTCCAGCCGAGCCCGAAGTGCGGCGGTGGACGAGCCTAACCAGCAGCCCCAGGAGAGGCTCCTTCTGCCTGTCTTCTC
TAGACCCAACACAACTCAGTCGTTTCTGCCAGAAACACAGTACCGAAGCTCATGTGCGTCTGAGTGCCCTCATCACGCCC
GGCCTGGCAGGGGGTCTGCAGGCCCTCAGTCACATGGGTCTACAAAACCTCAAAGCAGAGGTGGACCCATCTCTAGAACC
AGGCAGTGA
ATGGAACTTGACCAGAATGCCACTGAGAAAGTGAAGGCCATGTTCACGGCCATTGATGAGCTCCTGTATGAACAGAAGCC
GAGCGTGCACACACAGAGCCTGCAGAAAGAGTGCCAGCAGTGGGCGTCCAGCTTCCCTCACCTCAGGATTCTGGGTAGGC
AGATAATCACTTCGAGTGAAGGCTATGGATTGTACCCTAGATCCCCTTCTGCTGTGTCAGCTTCACATGAAGCAATCTTG
CCTCAAGAAAGAGAGTCTACCATATTTGGTATAAGGGGAAAGAAGTTACACTTTTCATCGTCTTACAAAGCATCTCCCAG
CACCAAAGCCTCTGGCTCGTCTGCTGATGGAGAGGAGGCGGACTGTATAATCTTCTCTGAAGGAATAATCGAGGAGTACC
TAGCTTTTGACCACACAGATATGGAAGAGGGATTTCATGGAAACAAATCAGAAGCAGCTACAGAGAAACAGAAGTTAGGG
TACCCTCCCATTGCACCATTTTACTGCATGAAAGAGGATGTTCTTGCTTATGTGTTTGACAACGTGTGGAGCAAGGCTGT
GGGCTGTATGGAGCAGTTGACACGTAGTCACTGGGAGGGATTTGCTTCTGATGATGAGAGTAACGTTGAAATTACCAGAC
TGGATTCGGGAAGTCCCTATATGCTGAACGAACAGCAGCCTTTGGTCTTACCTCGAGTGCCGCAGTCTAAGGTGATGTCA
GTCACCTCAAATCCGATGAATTTCTGTCAAGCAAGTGGTCATCAGCCAAACGTGAATGGCCTCTTGATTCATGGGATGCC
TCTACAGCCAAGGAATCTCTCCCTGATGGATAAGCTCCTAGATCTTGATGACAAGCTCCTCATGAGGCCTGGGTCCAGTT
CCGTCCTTTCAAACCGAAATTGGCCAAACCGAGCCATGGAGCTCAGTACATCATCCTTGTCATATACAACGCAGTCTGCC
AGGAGGCGCAACCCCCCACCACGCACCCTTCATCCGATCAGCACGAGCCACTCACGCACTGGAACACCGTGGCCTGCAGA
AGAAATCCTCAGAGGACCCCGGCTTCCGATGACAGCAGACTCACTCTCTTCTCCCTCACCAATGACCATGGGTCGGAACA
ACCTGCTGCCACCTATTGGAACAGCTGATGTAGAGCACCTGAGCATCCTGGGGTCCCAACGGCCAACAAAACCCCACGGT
GATTCCAGCCGAGCCCGAAGTGCGGCGGTGGACGAGCCTAACCAGCAGCCCCAGGAGAGGCTCCTTCTGCCTGTCTTCTC
TAGACCCAACACAACTCAGTCGTTTCTGCCAGAAACACAGTACCGAAGCTCATGTGCGTCTGAGTGCCCTCATCACGCCC
GGCCTGGCAGGGGGTCTGCAGGCCCTCAGTCACATGGGTCTACAAAACCTCAAAGCAGAGGTGGACCCATCTCTAGAACC
AGGCAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 17 .55 RPM |
| SRP017611_kidney | 35 .87 RPM |
| SRP017611_brain | 35 .59 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000138286 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000011281 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000016575 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000002623 | ortholog_one2one | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000002142 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_2124 | 78.78 | 63.69 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000006554 retrocopies