Parental gene: | Ap2m1, ENSRNOG00000001709 |
| Aliases: | Ap2m1, Ap50, Clapm1, mu2 |
| Description: | AP-2 complex subunit mu [Source:UniProtKB/Swiss-Prot;Acc:P84092] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 11:87113488..87122152(-) |
>ENSRNOG00000001709
ATGATCGGAGGCTTATTCATCTATAATCACAAGGGGGAGGTGCTTATCTCCCGAGTCTACAGAGATGACATCGGGAGGAA
TGCAGTGGATGCCTTTCGCGTCAATGTCATTCACGCACGGCAGCAGGTGCGCAGCCCTGTCACAAACATCGCTCGCACCA
GCTTCTTCCATGTTAAGCGGTCCAACATCTGGCTGGCAGCAGTCACCAAGCAGAATGTCAATGCCGCCATGGTCTTCGAA
TTCCTCTACAAGATGTGTGATGTAATGGCTGCTTACTTTGGCAAGATCAGCGAGGAGAACATCAAGAACAATTTCGTGCT
CATATACGAGCTGCTGGACGAGATTCTGGACTTTGGCTACCCACAGAACTCAGAGACAGGTGCACTGAAAACCTTCATCA
CCCAACAGGGTATCAAGAGTCAGCATCAGACAAAAGAAGAGCAGTCCCAGATCACCAGCCAGGTGACCGGGCAAATTGGC
TGGAGGCGGGAAGGCATCAAGTATCGTCGGAATGAACTCTTCCTAGATGTTCTGGAGAGTGTGAACCTGCTTATGTCCCC
ACAGGGGCAGGTGCTGAGTGCCCATGTGTCGGGCCGGGTGGTGATGAAGAGTTACCTGAGCGGCATGCCTGAGTGCAAGT
TTGGAATGAATGACAAGATTGTCATAGAAAAGCAGGGCAAAGGCACAGCCGATGAAACAAGCAAGAGTGGTAAGCAGTCG
ATCGCCATTGATGACTGCACCTTTCACCAGTGTGTGCGACTCAGCAAGTTTGACTCTGAGCGGAGCATCAGCTTTATCCC
TCCTGATGGAGAGTTTGAACTCATGAGATACCGTACTACCAAGGACATCATCCTGCCTTTCCGGGTGATCCCATTGGTGC
GGGAGGTGGGACGCACCAAACTGGAGGTCAAGGTGGTCATCAAGTCCAACTTCAAGCCCTCACTTCTGGCCCAGAAGATT
GAGGTGAGGATCCCAACCCCATTGAACACAAGCGGGGTGCAAGTGATCTGCATGAAGGGGAAGGCCAAGTACAAGGCCAG
CGAGAACGCCATTGTATGGAAGATCAAGCGCATGGCAGGCATGAAGGAATCACAGATCAGCGCAGAGATTGAGCTCCTGC
CCACCAATGATAAGAAGAAATGGGCTCGGCCCCCCATTTCCATGAACTTTGAGGTGCCATTTGCGCCTTCTGGCCTCAAG
GTGCGCTACTTGAAGGTATTTGAGCCGAAGCTGAACTACAGCGACCACGATGTCATCAAATGGGTGCGCTACATTGGCCG
AAGTGGCATTTACGAAACCCGCTGCTAG
ATGATCGGAGGCTTATTCATCTATAATCACAAGGGGGAGGTGCTTATCTCCCGAGTCTACAGAGATGACATCGGGAGGAA
TGCAGTGGATGCCTTTCGCGTCAATGTCATTCACGCACGGCAGCAGGTGCGCAGCCCTGTCACAAACATCGCTCGCACCA
GCTTCTTCCATGTTAAGCGGTCCAACATCTGGCTGGCAGCAGTCACCAAGCAGAATGTCAATGCCGCCATGGTCTTCGAA
TTCCTCTACAAGATGTGTGATGTAATGGCTGCTTACTTTGGCAAGATCAGCGAGGAGAACATCAAGAACAATTTCGTGCT
CATATACGAGCTGCTGGACGAGATTCTGGACTTTGGCTACCCACAGAACTCAGAGACAGGTGCACTGAAAACCTTCATCA
CCCAACAGGGTATCAAGAGTCAGCATCAGACAAAAGAAGAGCAGTCCCAGATCACCAGCCAGGTGACCGGGCAAATTGGC
TGGAGGCGGGAAGGCATCAAGTATCGTCGGAATGAACTCTTCCTAGATGTTCTGGAGAGTGTGAACCTGCTTATGTCCCC
ACAGGGGCAGGTGCTGAGTGCCCATGTGTCGGGCCGGGTGGTGATGAAGAGTTACCTGAGCGGCATGCCTGAGTGCAAGT
TTGGAATGAATGACAAGATTGTCATAGAAAAGCAGGGCAAAGGCACAGCCGATGAAACAAGCAAGAGTGGTAAGCAGTCG
ATCGCCATTGATGACTGCACCTTTCACCAGTGTGTGCGACTCAGCAAGTTTGACTCTGAGCGGAGCATCAGCTTTATCCC
TCCTGATGGAGAGTTTGAACTCATGAGATACCGTACTACCAAGGACATCATCCTGCCTTTCCGGGTGATCCCATTGGTGC
GGGAGGTGGGACGCACCAAACTGGAGGTCAAGGTGGTCATCAAGTCCAACTTCAAGCCCTCACTTCTGGCCCAGAAGATT
GAGGTGAGGATCCCAACCCCATTGAACACAAGCGGGGTGCAAGTGATCTGCATGAAGGGGAAGGCCAAGTACAAGGCCAG
CGAGAACGCCATTGTATGGAAGATCAAGCGCATGGCAGGCATGAAGGAATCACAGATCAGCGCAGAGATTGAGCTCCTGC
CCACCAATGATAAGAAGAAATGGGCTCGGCCCCCCATTTCCATGAACTTTGAGGTGCCATTTGCGCCTTCTGGCCTCAAG
GTGCGCTACTTGAAGGTATTTGAGCCGAAGCTGAACTACAGCGACCACGATGTCATCAAATGGGTGCGCTACATTGGCCG
AAGTGGCATTTACGAAACCCGCTGCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 63 .88 RPM |
| SRP017611_kidney | 226 .37 RPM |
| SRP017611_brain | 563 .24 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000020106 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000012257 | ortholog_one2one | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000002558 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000022841 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000004556 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000012286 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000008493 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_2342 | 79.69 | 58.39 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000001709 retrocopies