RetrogeneDB - Parental gene ENSPVAG00000009956 details

							
>ENSPVAG00000009956
ATGGCGTTGCGCGCGGCGCGGAGCATGCGGGCCGTGGCCTGTAGCCTGCGCGCCGCCTCGGCGCCCGCCGCGCCCTGCGC

ACCGCGGTTCTGGGGCCTGAGGGCGGGCGCCATCCGGACGCTGCGCACGGGCCCCAATCTGCTCTCGGTGCGCAAATTCA

CAGAGAAACATGAATGGATAACGACAGAAAATGGTATTGGAACAGTGGGAATCAGCAATTTTGCACAGGAAGCTTTGGGA

GATGTTGTTTACTGTAGTTTGCCTGAAGTTGGGACAAAATTGAACAAACAAGATGAGTTTGGTGCTTTGGAAAGTGTGAA

AGCTGCTAGTGAACTCTATTCTCCTCTGTCAGGAGAAGTAACTGAAATTAATGAAGCCCTTGCAGAAAATCCAGGACTTG

TCAACAAATCTTGTTATGATGATGGTTGGCTGATCAAGATGACACTGAGTAACCCTTCAGAACTAGATGAACTAATGAGT

GAAGAAGCATATGAGAAATACATAAAATCTATTGAGAACTGA

Species	Parental gene accession	Homology type	Retrogenes number
Anolis carolinensis	ENSACAG00000008905	ortholog_one2one	1 retrogene	retro_acar_75,
Ailuropoda melanoleuca	ENSAMEG00000013959	ortholog_one2one	5 retrogenes	retro_amel_1362, retro_amel_1877, retro_amel_229, retro_amel_432, retro_amel_80,
Bos taurus	ENSBTAG00000006795	possible_ortholog	8 retrogenes	retro_btau_1128, retro_btau_12, retro_btau_1483, retro_btau_1543, retro_btau_1628, retro_btau_246, retro_btau_265, retro_btau_94,
Canis familiaris	ENSCAFG00000020014	ortholog_one2one	5 retrogenes	retro_cfam_1249, retro_cfam_1543, retro_cfam_358, retro_cfam_618, retro_cfam_732,
Choloepus hoffmanni	ENSCHOG00000002434	ortholog_one2one	37 retrogenes	retro_chof_1011, retro_chof_1019, retro_chof_1123, retro_chof_1213, retro_chof_1324, retro_chof_1410, retro_chof_1482, retro_chof_1550, retro_chof_163, retro_chof_1647, retro_chof_1659, retro_chof_1690, retro_chof_1705, retro_chof_1722, retro_chof_178, retro_chof_1781, retro_chof_1787, retro_chof_219, retro_chof_2264, retro_chof_2289, retro_chof_2319, retro_chof_2412, retro_chof_2466, retro_chof_2494, retro_chof_2632, retro_chof_2657, retro_chof_283, retro_chof_335, retro_chof_361, retro_chof_362, retro_chof_363, retro_chof_419, retro_chof_433, retro_chof_477, retro_chof_597, retro_chof_755, retro_chof_931,
Callithrix jacchus	ENSCJAG00000016654	ortholog_one2one	8 retrogenes	retro_cjac_1071, retro_cjac_1576, retro_cjac_1674, retro_cjac_1804, retro_cjac_2650, retro_cjac_3280, retro_cjac_3470, retro_cjac_552,
Cavia porcellus	ENSCPOG00000009983	ortholog_one2one	3 retrogenes	retro_cpor_1240, retro_cpor_385, retro_cpor_463,
Dipodomys ordii	ENSDORG00000007831	ortholog_one2one	1 retrogene	retro_dord_645,
Felis catus	ENSFCAG00000013038	ortholog_one2many	8 retrogenes	retro_fcat_1007, retro_fcat_1112, retro_fcat_1294, retro_fcat_1435, retro_fcat_1627, retro_fcat_1920, retro_fcat_215, retro_fcat_354,
Loxodonta africana	ENSLAFG00000015586	ortholog_one2one	3 retrogenes	retro_lafr_554, retro_lafr_822, retro_lafr_900,
Myotis lucifugus	ENSMLUG00000005783	ortholog_one2one	12 retrogenes	retro_mluc_1151, retro_mluc_1221, retro_mluc_1466, retro_mluc_1538, retro_mluc_1659, retro_mluc_1685, retro_mluc_2089, retro_mluc_2090, retro_mluc_2139, retro_mluc_2314, retro_mluc_2411, retro_mluc_709,
Macaca mulatta	ENSMMUG00000013088	ortholog_one2many	5 retrogenes	retro_mmul_1192, retro_mmul_2202, retro_mmul_661, retro_mmul_840, retro_mmul_960,
Mustela putorius furo	ENSMPUG00000009677	ortholog_one2one	4 retrogenes	retro_mputfur_1434, retro_mputfur_1492, retro_mputfur_349, retro_mputfur_809,
Mus musculus	ENSMUSG00000034424	ortholog_one2one	8 retrogenes	retro_mmus_1880, retro_mmus_2144, retro_mmus_2235, retro_mmus_3062, retro_mmus_3303, retro_mmus_3459, retro_mmus_3610, retro_mmus_3703,
Nomascus leucogenys	ENSNLEG00000026844	possible_ortholog	1 retrogene	retro_nleu_365,
Ochotona princeps	ENSOPRG00000003281	ortholog_one2one	1 retrogene	retro_opri_790,
Procavia capensis	ENSPCAG00000005820	ortholog_one2one	1 retrogene	retro_pcap_207,
Rattus norvegicus	ENSRNOG00000011535	ortholog_one2one	6 retrogenes	retro_rnor_1217, retro_rnor_1218, retro_rnor_1400, retro_rnor_1910, retro_rnor_2691, retro_rnor_557,
Sarcophilus harrisii	ENSSHAG00000005529	ortholog_one2one	1 retrogene	retro_shar_239,
Ictidomys tridecemlineatus	ENSSTOG00000016433	ortholog_one2many	2 retrogenes	retro_itri_31, retro_itri_34,
Tupaia belangeri	ENSTBEG00000000056	ortholog_one2one	27 retrogenes	retro_tbel_1426, retro_tbel_1716, retro_tbel_1766, retro_tbel_1846, retro_tbel_1923, retro_tbel_2026, retro_tbel_2074, retro_tbel_2168, retro_tbel_2315, retro_tbel_2426, retro_tbel_2489, retro_tbel_2515, retro_tbel_2573, retro_tbel_2769, retro_tbel_3007, retro_tbel_3025, retro_tbel_311, retro_tbel_3140, retro_tbel_3458, retro_tbel_3852, retro_tbel_3924, retro_tbel_4173, retro_tbel_4727, retro_tbel_597, retro_tbel_601, retro_tbel_609, retro_tbel_825,
Tarsius syrichta	ENSTSYG00000000248	ortholog_one2one	13 retrogenes	retro_tsyr_119, retro_tsyr_1311, retro_tsyr_1367, retro_tsyr_1833, retro_tsyr_2023, retro_tsyr_2173, retro_tsyr_309, retro_tsyr_328, retro_tsyr_363, retro_tsyr_429, retro_tsyr_439, retro_tsyr_587, retro_tsyr_643,

#	RetrogeneDB ID	Identity (%)	Coverage (%)	ORF conservation	Expression evidence	RDV
1.	retro_pvam_78	79.00	56.65	Please wait, loading	Please wait, loading	Please wait, loading
2.	retro_pvam_194	63.03	94.22	Please wait, loading	Please wait, loading	Please wait, loading
3.	retro_pvam_552	76.13	86.71	Please wait, loading	Please wait, loading	Please wait, loading
4.	retro_pvam_583	78.95	75.72	Please wait, loading	Please wait, loading	Please wait, loading
5.	retro_pvam_958	78.41	100.00	Please wait, loading	Please wait, loading	Please wait, loading
6.	retro_pvam_1253	65.85	93.64	Please wait, loading	Please wait, loading	Please wait, loading
7.	retro_pvam_1474	78.43	57.80	Please wait, loading	Please wait, loading	Please wait, loading
8.	retro_pvam_1481	68.57	100.00	Please wait, loading	Please wait, loading	Please wait, loading

Download FASTA sequences of all ENSPVAG00000009956 retrocopies

Parental gene:	GCSH, ENSPVAG00000009956
Aliases:	None
Description:	glycine cleavage system protein H (aminomethyl carrier) [Source:HGNC Symbol;Acc:4208]
Organism:	*Megabat (Pteropus vampyrus)*
Coordinates:	GeneScaffold_2820:59201..66743(-)

Parental gene:

GCSH, ENSPVAG00000009956