Parental gene:

TRMT2B, ENSPTRG00000023413

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:X:101333510..101376274(-)


>ENSPTRG00000023413
ATGGCAGGCCTTAAGAGAAGAGTCCCACTGCACAGCCTCAGATACTTCATCTCCATGGTGGGTCTCTTCTCCAAACCAGG
ACTGCTTCCCTGGTATGCCAGAAATCCACCAGGATGGTCACAGCTCTTTCTGGGCACAGTATGTAAGGGAGATTTCACCC
GTGTGATAGCCACGAAATGTCAGAAAGGACAAAAAAGTCAGAAGAAACCAAGCCATCTTGGACCACTAGATGGTTCCTGG
CAGGAAAGGCTGGCTGATGTTGTGACACCACTCTGGAGGTTGAGCTATGAAGAACAGCTCAAGGTGAAATTTGCAGCTCA
GAAGAAAATTTTACAAAGACTAGAGTCTTACATCCAAATGCTCAATGGAGTCAGTGTGACAACGGCTGTACCCAAATCTG
AGAGGCTCTCTTGTCTTCTCCATCCTATTATACCCTCTCCTGTCATCAATGGTTACCGAAATAAGTCCACCTTCTCTGTG
AACCGAGGTCCAGATGGCAATCCAAAGACTGTGGGGTTCTACCTGGGAACTTGGAGAGATGGGAACGTTGTCTGTGTGCA
GTCTAATCATCTGAAAAACATCCCTGAGAAACACAGTCAAGTGGCGCAGTACTATGAAGTATTCCTTCGACAGTCTCCAT
TGGAGCCCTGCCTTGTATTTCATGAAGGTGGATACTGGCGTGAGCTCACAGTCCGCACCAATAGCCAAGGGCACACAATG
GCTATCATCACTTTCCATCCCCAGAAATTAAGTCAGGAGGAGCTCCATGTTCAGAAGGAGATTGTAAAGGAATTTTTCAT
CAGAGGTCCTGGAGCAGCCTGTGGCTTGACCTCACTTTACTTCCAGGAAAGTACCATGACCCGTTGCAGCCATCAGCAGT
CTCCCTATCAGCTTCTGTTTGGGGAACCCTACATCTTTGAAGAACTTCTGAGCTTGAAGATCCGCATCTCTCCAGATGCC
TTTTTCCAGATTAACACAGCTGGTGCAGAGATGCTGTATCGGACTGTGGGGGAGCTGACTGGAGTGAACTCTGACACCAT
CCTTCTTGACATCTGCTGTGGAACTGGTGTGATTGGCCTCTCTCTGGCTCAGCATACATCTCGGGTCCTTGGGATTGAAT
TGGTGGAGCAGGCAGTGGAGGATGCAAGATGGACTGCAGCCTTCAATGGCATCACCAACTCTGAATTTCATACTGGTCAA
GCAGAGAAGATTTTGCCAGGGCTGCTAAAGTCAAAGGAAGATGGACAGTCAATTGTTGCTGTGGTGAACCCAGCCCGTGC
CGGACTGCATTACAAGGTGATTCAAGCCATTCGAAACTTCAGGGCCATCCACACGCTAGTTTTTGTTTCCTGCAAGCTCC
ATGGTGAATCCACTAGGAATGTCATTGAGCTGTGCTGTCCTCCAGACCCTGCTAAGAAGCTCTTAGGCGAGCCCTTTGTC
CTGCAGCAAGCTGTACCTGTGGATTTGTTCCCTCACACCCCACATTGTGAGCTGGTGCTCCTCTTTACTCGATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 8 .99 RPM
SRP007412_cerebellum 8 .64 RPM
SRP007412_heart 14 .40 RPM
SRP007412_kidney 18 .20 RPM
SRP007412_liver 11 .42 RPM
SRP007412_testis 4 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000004570 ortholog_one2one 1 retrogene
retro_cjac_1676,
Homo sapiens ENSG00000188917 ortholog_one2one 1 retrogene
retro_hsap_272,
Gorilla gorilla ENSGGOG00000023759 ortholog_one2one 1 retrogene
retro_ggor_319,
Macropus eugenii ENSMEUG00000006532 ortholog_one2many 2 retrogenes
retro_meug_1325, retro_meug_74,
Macaca mulatta ENSMMUG00000010394 ortholog_one2one 1 retrogene
retro_mmul_567,
Monodelphis domestica ENSMODG00000025630 ortholog_one2many 1 retrogene
retro_mdom_77,
Nomascus leucogenys ENSNLEG00000007522 ortholog_one2one 1 retrogene
retro_nleu_1485,
Pongo abelii ENSPPYG00000020545 ortholog_one2one 1 retrogene
retro_pabe_397,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_228 76.75 70.44
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Download FASTA sequences of all ENSPTRG00000023413 retrocopies