Parental gene:

TRMT2B, ENSCJAG00000004570

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:X:90245016..90289956(-)


>ENSCJAG00000004570
ATGGCAGTCCTTAAGAGAAGAGTCCCAATGCACAGCCTCAGATACTTCCTCTCCATGGTGGGTCTCTTCTCCAAACCAGG
ACTGCTTCCCTCATATGCCAGAAATCCACCAGGATGGTCAAAGCTCTTTCTGGGCACAGTATGTAAGGGAGATTTTACCC
ATGTGATAGCCACGAAGTATCAGAAAGGACAAAAAAGTCAAAAGAAACCAAGCCATCTTGGACCACTAGATGATTCCTGG
CAGGAAAGGCTGGCTGATGTTGTGACACCACTCTGGAGGTTGAGCTATGAAGAACAGCTCAAGGTTAAATTTGAAGCTCA
GAAGAAAATTTTACAAAGACTAGAGTCTTACATCCAAATGCTCAATGGAGTCGATGTGACAACAGCTGTACCCAAATCTG
AGAGGCTCTCTTGTCTTCTCCATCCTATTATACCCTCTCCTGTCATCAATGGTTACCGAAATAAGTCCACCTTCTCTGTG
AACCGAGGTCCAGATGGCAATCCAAAGACCGTGGGGTACTACCTGGGTACTTGGAGAGGTGGGAACATTGTCTGTGTGCA
GTCTAATCATCTGAAAAACATCCCTGAGAAACATAGTCAAGTGGCACAGTACTATGAAATATTCCTTCGACAGTCTCCAA
TGGAGCCCTGCCTTGTATTTCATGAAGGTGGATACTGGCGTGAGCTCATAGTCCGCACCAATAGCCAAGGGCACACAATG
GCAATCATCACTTTGCATCCCCAGAAATTAAGTCAGGAGGAGCTCCGTGGTCAGAAGGAGATTGTAAAGGAATTTTTCAT
CAAAGGTCCTGGAGCAGCCTGTGATTTGACCTCACTTTACTTTCAGGAAAGTACCATGACCCGTTGCAGCCATCAGCAGT
CCCCCTTTGAGCTTCTGTTTGGAGAACCCTACATCTTTGAAGAACTTCTGAGCTTGAAGATTCGCATTTCTCCAGATGCC
TTTTTCCAGATTAACACTGCTGGTGCAGAGATGCTGTATCGGACTGTTGGGGAGCTGGCTGGAGTGAACTCTGACACCAT
CCTTCTTGACATCTGCTGTGGAACTGGTGTGATTGGTCTCTCTCTGGCTCAGCATACATCTCAGGTCCTCGGGATTGAAT
TGGTGGAGCAGGCAGTGGAGGATGCAAGGTGGACTGCAGCTTACAATGGTATCACCAACTCTGAATTTCACACTGGTCGA
GCAGAGAAGATTTTGCCAGGGCTTTTAAAGTCAAAGGAAGATGGACAGTCAATTGTTGCTGTGGTGAACCCAGCCCGTGC
CGGACTGCATTACAAGGTGGTTCAAGCCATTCGAAACTGCAGGGCCATCCGCAGGCTAGTTTTTGTTTCCTGCAAGCTCC
ACGGTGAAACCACAAGGAATGTCATTGAGCTGTGCTGTCCTCCAAACCCTGCTAAGAAGCTCTTAGGTGAGCCCTTTCTC
CTGCAGCAAGCTGTACCTGTGGATTTGTTCCCCCACACCCCACACTGTGAGCTGGTGCTCCTCTTCAGTCGATGA

Library Parental gene expression (RPM)
SRP051959_spleen 9 .68 RPM
SRP051959_skeletal_muscle 3 .49 RPM
SRP051959_lymph_node 10 .68 RPM
SRP051959_lung 8 .44 RPM
SRP051959_liver 10 .05 RPM
SRP051959_kidney 11 .20 RPM
SRP051959_heart 7 .47 RPM
SRP051959_colon 6 .55 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000188917 ortholog_one2one 1 retrogene
retro_hsap_272,
Gorilla gorilla ENSGGOG00000023759 ortholog_one2one 1 retrogene
retro_ggor_319,
Macropus eugenii ENSMEUG00000006532 ortholog_one2many 2 retrogenes
retro_meug_1325, retro_meug_74,
Macaca mulatta ENSMMUG00000010394 ortholog_one2one 1 retrogene
retro_mmul_567,
Monodelphis domestica ENSMODG00000025630 ortholog_one2many 1 retrogene
retro_mdom_77,
Nomascus leucogenys ENSNLEG00000007522 ortholog_one2one 1 retrogene
retro_nleu_1485,
Pongo abelii ENSPPYG00000020545 ortholog_one2one 1 retrogene
retro_pabe_397,
Pan troglodytes ENSPTRG00000023413 ortholog_one2one 1 retrogene
retro_ptro_228,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1676 69.36 70.44
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Download FASTA sequences of all ENSCJAG00000004570 retrocopies