Parental gene:

PIGA, ENSPTRG00000021684

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:X:15446888..15463864(-)


>ENSPTRG00000021684
ATGGCCTGTAGAGGAGGAGCTGGGAATGGCCACCGTGCCTCAGCTACACTCTCTCGGGTTAGCCCTGGAAGTCTTTACAC
ATGTAGAACCCGTACCCATAATATATGCATGGTATCTGACTTTTTCTACCCAAATATGGGAGGCGTGGAAAGCCACATTT
ACCAGCTCTCTCAGTGCCTGATTGAAAGAGGGCATAAGGTTATAATTGTCACCCATGCTTATGGAAATCGAAAAGGCATC
CGTTACCTCACCAATGGCCTCAAAGTCTATTACTTGCCTCTGAAAGTCATGTACAACCAGTCTACAGCCACGACCCTCTT
TCACAGTCTGCCATTGCTCAGGTACATATTTGTTCGGGAGAGAGTCACGATAATCCATTCACATAGTTCTTTTTCTGCTA
TGGCCCATGATGCTCTCTTCCACGCCAAGACAATGGGGCTTCAGACAGTCTTCACGGACCATTCCCTTTTTGGATTTGCT
GATGTCAGCTCGGTGCTTACAAACAAGCTTCTAACCGTGTCTCTTTGTGATACAAACCACATCATTTGTGTGTCTTATAC
TAGTAAGGAAAATACTGTACTAAGAGCAGCACTGAATCCTGAAATAGTGTCCGTCATTCCTAATGCTGTAGATCCTACTG
ACTTCACTCCAGACCCATTTAGAAGGCATGATAGTATAACTATTGTTGTTGTCAGCAGACTTGTTTACAGAAAAGGGATC
GATTTGCTTAGTGGTATAATACCTGAACTCTGTCAGAAATATCCAGATTTAAATTTCATAATTGGAGGAGAGGGACCAAA
GAGAATCATTTTGGAAGAAGTTCGGGAAAGATACCAGCTGCATGACAGGGTGCGTCTTTTGGGAGCTTTAGAACACAAGG
ATGTTAGAAATGTCTTAGTTCAAGGACATATTTTTCTGAATACCTCCCTTACTGAAGCATTCTGCATGGCGATCGTGGAA
GCAGCCAGTTGTGGTTTACAGGTTGTAAGTACCAGAGTTGGTGGAATTCCTGAGGTGCTTCCAGAAAACCTTATTATTTT
ATGTGAGCCTTCAGTAAAATCTTTGTGTGAAGGATTGGAAAAGGCTATTTTCCAACTGAAGTCAGGGACATTGCCAGCTC
CAGAAAACATCCATAACATAGTAAAGACTTTCTACACCTGGAGGAATGTTGCAGAAAGAACTGAAAAGGTATATGACCGG
GTATCAGTGGAAGCTGTGTTGCCAATGGACAAACGACTGGACAGACTTATTTCTCACTGCGGCCCAGTAACAGGCTACAT
CTTTGCTTTGTTGGCAGTTTTCAACTTCCTCTTCCTCATTTTCTTGAGATGGATGACTCCAGATTCTATCATTGATGTTG
CAATAGATGCCACTGGGCCACGGGGTGCCTGGACTAATAACTATTCTCACAGTAAAAGAGGGGGTGAGAACAATGAGATA
TCCGAAACCAGGTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 4 .43 RPM
SRP007412_cerebellum 6 .99 RPM
SRP007412_heart 2 .68 RPM
SRP007412_kidney 7 .01 RPM
SRP007412_liver 5 .60 RPM
SRP007412_testis 7 .38 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000006415 ortholog_one2one 1 retrogene
retro_chof_2311,
Homo sapiens ENSG00000165195 ortholog_one2one 1 retrogene
retro_hsap_1050,
Gorilla gorilla ENSGGOG00000007293 ortholog_one2one 1 retrogene
retro_ggor_828,
Nomascus leucogenys ENSNLEG00000009352 ortholog_one2one 1 retrogene
retro_nleu_2070,
Ochotona princeps ENSOPRG00000015381 ortholog_one2one 1 retrogene
retro_opri_1065,
Pongo abelii ENSPPYG00000020142 ortholog_one2one 1 retrogene
retro_pabe_876,
Rattus norvegicus ENSRNOG00000003554 ortholog_one2one 1 retrogene
retro_rnor_2566,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_716 86.19 100.00
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Download FASTA sequences of all ENSPTRG00000021684 retrocopies