Parental gene:

CHRAC1, ENSPTRG00000020621

Aliases:None
Description:chromatin accessibility complex 1 [Source:HGNC Symbol;Acc:13544]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:8:139274676..139278425(+)


>ENSPTRG00000020621
ATGGCGGACGTGTCGTGGGTAAAGACAAGGGGCGGGGAGCAGCGGCTCAGATTCCTGCCTCTACGCATCCGGGTCATCAT
GAAGAGCTCCCCCCACGTGTCCAGCATCAACCAGGAGGCGTTGGTGCTCACGGCCAAGGCCACGGAGCTCTTTGTTCAAT
GCCTAGCCACCTATTCCTACAGACACGGCAGTGGAAAGGAAAAGAAAGTACTGACTTACAGTGATTTAGCAAACACTGCA
CAGCAATCAGAAACTTTTCAGTTTCTTGCAGATATATTACCAAAGAAGATTTTAGCTAGTAAATACCTGAAAATGCTTAA
AGAGGAAAAGAGGGAAGAAGATGAGAATGACAATGATAATGAAAGTGACCATGATGAAGCTGACTCC

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 1 .81 RPM
SRP007412_cerebellum 1 .61 RPM
SRP007412_heart 1 .49 RPM
SRP007412_kidney 3 .19 RPM
SRP007412_liver 2 .85 RPM
SRP007412_testis 4 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000005017 ortholog_one2one 1 retrogene
retro_amel_1736,
Cavia porcellus ENSCPOG00000010427 ortholog_one2one 5 retrogenes
retro_cpor_1545, retro_cpor_721, retro_cpor_722, retro_cpor_723, retro_cpor_724,
Loxodonta africana ENSLAFG00000001188 ortholog_one2one 1 retrogene
retro_lafr_932,
Monodelphis domestica ENSMODG00000000756 ortholog_one2one 2 retrogenes
retro_mdom_1379, retro_mdom_355,
Ochotona princeps ENSOPRG00000008780 ortholog_one2one 2 retrogenes
retro_opri_636, retro_opri_726,
Ictidomys tridecemlineatus ENSSTOG00000008105 ortholog_one2one 1 retrogene
retro_itri_358,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2764 55.64 95.35
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Download FASTA sequences of all ENSPTRG00000020621 retrocopies