Parental gene:

NDUFB9, ENSPTRG00000020569

Aliases:None
Description:Pan troglodytes NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa (NDUFB9), nuclear gene encoding mitochondrial protein, mRNA. [Source:RefSeq mRNA;Acc:NM_001071799]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:8:123212742..123223635(+)


>ENSPTRG00000020569
ATGGCGTTCTTGGCGTCGGGACCCTACCTGACCCATCAGCAAAAGGTGTTGCGGCTTTATAAGCGGGCGCTACGCCACCT
CGAGTCGTGGTGCGTCCAGAGAGACAAATACCGATACTTTGCTTGTTTGATGAGAGCCCGGTTTGAAGAACATAAGAATG
AAAAGGATATGGCGAAGGCCACCCAGCTGCTGAAGGAGGCCGAGGAAGAATTCTGGTACCGTCAGCATCCACAGCCATAC
ATCTTCCCTGACTCTCCTGGGGGCACCTCCTATGAGAGATACGATTGCTACAAGGTCCCAGAATGGTGCTTAGATGACTG
GCATCCTTCTGAGAAGGCAATGTATCCTGATTACTTTGCCAAGAGAGAAAAGTGGAAGAAACTGCGGAGGGAAAGCTGGG
AACGAGAGGTTAAGCAGCTGCAGGAGGAAACGCCACCTGGTGGTCCTTTAACTGAAGCTTTGCCCCCTGCCCGAAAGGAA
GGTGATTTGCCCCCACTGTGGTGGTATATTGTGACCAGACCCCGGGAGCGGCCCATGTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 128 .73 RPM
SRP007412_cerebellum 72 .45 RPM
SRP007412_heart 132 .47 RPM
SRP007412_kidney 140 .28 RPM
SRP007412_liver 97 .45 RPM
SRP007412_testis 67 .97 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000010022 ortholog_one2one 1 retrogene
retro_acar_132,
Ailuropoda melanoleuca ENSAMEG00000015852 ortholog_one2one 2 retrogenes
retro_amel_1680, retro_amel_553,
Callithrix jacchus ENSCJAG00000012818 ortholog_one2one 1 retrogene
retro_cjac_2125,
Equus caballus ENSECAG00000018238 ortholog_one2one 1 retrogene
retro_ecab_541,
Felis catus ENSFCAG00000004678 ortholog_one2one 1 retrogene
retro_fcat_689,
Homo sapiens ENSG00000147684 ortholog_one2one 2 retrogenes
retro_hsap_3905, retro_hsap_4112,
Gorilla gorilla ENSGGOG00000015883 ortholog_one2one 2 retrogenes
retro_ggor_2632, retro_ggor_2759,
Microcebus murinus ENSMICG00000017481 ortholog_one2one 1 retrogene
retro_mmur_1494,
Myotis lucifugus ENSMLUG00000003765 ortholog_one2one 1 retrogene
retro_mluc_1339,
Macaca mulatta ENSMMUG00000015493 ortholog_one2one 1 retrogene
retro_mmul_1736,
Monodelphis domestica ENSMODG00000001831 ortholog_one2one 3 retrogenes
retro_mdom_1176, retro_mdom_1193, retro_mdom_1582,
Nomascus leucogenys ENSNLEG00000005484 ortholog_one2one 2 retrogenes
retro_nleu_1141, retro_nleu_578,
Otolemur garnettii ENSOGAG00000030772 ortholog_one2one 2 retrogenes
retro_ogar_1654, retro_ogar_925,
Pongo abelii ENSPPYG00000018869 ortholog_one2one 3 retrogenes
retro_pabe_2643, retro_pabe_3182, retro_pabe_3366,
Pteropus vampyrus ENSPVAG00000009153 ortholog_one2one 1 retrogene
retro_pvam_243,
Ictidomys tridecemlineatus ENSSTOG00000021955 ortholog_one2one 1 retrogene
retro_itri_611,
Tupaia belangeri ENSTBEG00000006895 ortholog_one2one 3 retrogenes
retro_tbel_1901, retro_tbel_2663, retro_tbel_610,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2656 79.49 87.15
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2. retro_ptro_2791 65.38 71.51
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Download FASTA sequences of all ENSPTRG00000020569 retrocopies