Parental gene:

MTCH1, ENSPTRG00000018115

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:6:37449407..37468039(-)


>ENSPTRG00000018115
ATGGGAGCTTCGGACCCGGAAGTGGCGCCCTGGGCTCGCGGCGGTGCCGCGGGGATGGCGGGAGCCGGAGCTGGAGCCGG
AGCTCGCGGCGGAGCGGCGGCGGGGGTCGAGGCTCGAGCTCGCGATCCACCGCCTGCGCACCGCGCACATCCTCGCCACC
CTCGGCCTGCGGCTCAGCCCTCGGCCCGCAGGATGGATGGCGGGTCAGGGGGCCTGGGGTCTGGGGACAACGCCCCGACC
ACTGAGGCTCTTTTCGTGGCACTGGGCGCGGGCGTGACGGCGCTCAGCCATCCCCTGCTCTACGTGAAGCTGCTCATCCA
GGTGGGTCATGAGCCGATGCCCCCCACCCTTGGGACCAATGTGCTGGGGAGGAAGGTCCTCTATCTGCCGAGCTTCTTCA
CCTACGCCAAGTACATCGTGCAAGTGGATGGTAAGATAGGGCTGTTCCGAGGCCTGAGCCCCCGGCTGATGTCCAACGCC
CTCTCTACTGTGACTCGGGGTAGCATGAAGAAGGTTTTCCCTCCAGATGAGATTGAGCAGGTTTCCAACAAGGATGATAT
GAAGACTTCCCTGAAGAAAGTTGTGAAGGAGACCTCCTACGAGATGATGATGCAGTGTGTGTCCCGCATGTTGGCCCACC
CCCTGCATGTCATCTCAATGCGCTGCATGGTCCAGTTTGTGGGACGGGAGGCCAAGTACAGTGGTGTGCTGAGCTCCATT
GGGAAGATTTTCAAAGAGGAAGGGCTGCTGGGATTCTTTGTTGGATTAATCCCTCACCTCCTGGGCGATGTGGTTTTCTT
GTGGGGCTGTAACCTGCTGGCCCACTTCATCAATGCCTACCTGGTGGATGACAGCTTCAGCCAGGCCCTGGCCATCCGGA
GCTATACCAAGTTCGTGATGGGGATTGCAGTGAGCATGCTGACCTACCCCTTCCTGCTAGTTGGCGACCTCATGGCTGTG
AACAACTGCGGGCTGCAAGCTGGGCTCCCCCCTTACTCCCCGGTGTTCAAATCCTGGATTCACTGCTGGAAGTACCTGAG
TGTGCAGGGCCAGCTCTTCCGAGGCTCCAGCCTGCTTTTCCGCCGGGTGTCATCAGGATCATGCTTTGCCCTGGAGTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 372 .86 RPM
SRP007412_cerebellum 155 .37 RPM
SRP007412_heart 68 .73 RPM
SRP007412_kidney 180 .34 RPM
SRP007412_liver 72 .18 RPM
SRP007412_testis 41 .63 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000137409 ortholog_one2one 2 retrogenes
retro_hsap_3671, retro_hsap_856,
Gorilla gorilla ENSGGOG00000003908 ortholog_one2one 1 retrogene
retro_ggor_2481,
Macaca mulatta ENSMMUG00000021976 ortholog_one2one 1 retrogene
retro_mmul_1060,
Nomascus leucogenys ENSNLEG00000010899 ortholog_one2one 1 retrogene
retro_nleu_423,
Pongo abelii ENSPPYG00000016557 ortholog_one2one 2 retrogenes
retro_pabe_3011, retro_pabe_691,
Pan troglodytes ENSPTRG00000003573 within_species_paralog 2 retrogenes
retro_ptro_1144, retro_ptro_710,
Tarsius syrichta ENSTSYG00000014777 ortholog_one2one 1 retrogene
retro_tsyr_488,
Tursiops truncatus ENSTTRG00000001966 ortholog_one2one 2 retrogenes
retro_ttru_1101, retro_ttru_563,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2490 83.01 69.35
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Download FASTA sequences of all ENSPTRG00000018115 retrocopies