Parental gene: | MTCH1, ENSPPYG00000016557 |
| Aliases: | None |
| Description: | mitochondrial carrier 1 [Source:HGNC Symbol;Acc:17586] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 6:37011857..37035676(-) |
>ENSPPYG00000016557
ATGGCGGGAAGCCGGAGCTGGAGCGGGAGCTCGCGGCGGAGCGGCGGCGGGGGTCGAGGCTCGGAGCTCGCGATCCACCG
CCCGCGCACCGCGCACATCCTCGGCACCCTCGGCCTGCGGCTCAGCCCTCGGCCGCGCAGGATGGAATGGCGGGTCAATG
GGGGCTCTCGGGGTCTGGGGACAACGCCCCGCACCACTGAGGCTCTTTTCGTGGCACTGGGCGCGGGCGTGACGGCGCTC
AGCCATCCCCTGCTCTACGTGAAGCTGATCTGCATCCAGGTGGGTCATGAGCCGATGCCCCCCACCCTTGGGACCAATGT
GCTGGGGAGGAAGGTCCTCTATCTGCCGAGCTTCTTCACCTACGCCAAGTACATCGTGCAAGTGGATGGTAAGATAGGGC
TGTTCCGAGGCCTGAGCCCCCGGCTGATGTCCAACGCCCTCTCCACTGTCACTCGGGGTAGCATGAAGAAGGTTTTCCCT
CCAGATGAGATTGAGCAGGTTTCCAACAAGGATGATATGAAGACTTCCCTGAAGAAAGTTGTGAAGGAGACCTCCTACGA
GATGATGATGCAGTGTGTGTCCCGCATGTTGGCCCACCCCCTGCATGTCATCTCAATGCGCTGCATGGTCCAGTTTGTGG
GACGGGAGGCCAAGTACAGTGGTGTGCTGAGCTCCATTGGGAAGATTTTTAAAGAGGAAGGGCTGCTGGGATTCTTTGTT
GGATTAATCCCTCACCTCCTGGGCGATGTGGTTTTCTTGTGGGGCTGTAACCTGCTGGCCCACTTCATCAATGCCTACCT
GGTGGATGACAGCGTGAGTGACACCCCAGGGGGGCTGGGAAACGACCAGAATCCAGGTTCCCAGTTCAGCCAGGCCCTGG
CCATCCGGAGCTATACCAAGTTCGTGATGGGGATTGCAGTGAGCATGCTGACCTACCCCTTCCTGCTAGTTGGCGACCTC
ATGGCTGTGAACAACTGCGGGCTGCAAGCTGGGCTCCCCCCTTACTCCCCGGTGTTCAAATCCTGGATTCACTGCTGGAA
GTACCTGAGTGTGCAGGCAGATTCTGCCCTCCAGGGATGTAGGTCGAGGCCGTCCACCCCGGAGGGCCAGCTCTTCCGAG
GCTCCAGCCTGCTTTTCCGCCGGGTGTCATCAGGATCATGCTTCGCCCTGGAGTAA
ATGGCGGGAAGCCGGAGCTGGAGCGGGAGCTCGCGGCGGAGCGGCGGCGGGGGTCGAGGCTCGGAGCTCGCGATCCACCG
CCCGCGCACCGCGCACATCCTCGGCACCCTCGGCCTGCGGCTCAGCCCTCGGCCGCGCAGGATGGAATGGCGGGTCAATG
GGGGCTCTCGGGGTCTGGGGACAACGCCCCGCACCACTGAGGCTCTTTTCGTGGCACTGGGCGCGGGCGTGACGGCGCTC
AGCCATCCCCTGCTCTACGTGAAGCTGATCTGCATCCAGGTGGGTCATGAGCCGATGCCCCCCACCCTTGGGACCAATGT
GCTGGGGAGGAAGGTCCTCTATCTGCCGAGCTTCTTCACCTACGCCAAGTACATCGTGCAAGTGGATGGTAAGATAGGGC
TGTTCCGAGGCCTGAGCCCCCGGCTGATGTCCAACGCCCTCTCCACTGTCACTCGGGGTAGCATGAAGAAGGTTTTCCCT
CCAGATGAGATTGAGCAGGTTTCCAACAAGGATGATATGAAGACTTCCCTGAAGAAAGTTGTGAAGGAGACCTCCTACGA
GATGATGATGCAGTGTGTGTCCCGCATGTTGGCCCACCCCCTGCATGTCATCTCAATGCGCTGCATGGTCCAGTTTGTGG
GACGGGAGGCCAAGTACAGTGGTGTGCTGAGCTCCATTGGGAAGATTTTTAAAGAGGAAGGGCTGCTGGGATTCTTTGTT
GGATTAATCCCTCACCTCCTGGGCGATGTGGTTTTCTTGTGGGGCTGTAACCTGCTGGCCCACTTCATCAATGCCTACCT
GGTGGATGACAGCGTGAGTGACACCCCAGGGGGGCTGGGAAACGACCAGAATCCAGGTTCCCAGTTCAGCCAGGCCCTGG
CCATCCGGAGCTATACCAAGTTCGTGATGGGGATTGCAGTGAGCATGCTGACCTACCCCTTCCTGCTAGTTGGCGACCTC
ATGGCTGTGAACAACTGCGGGCTGCAAGCTGGGCTCCCCCCTTACTCCCCGGTGTTCAAATCCTGGATTCACTGCTGGAA
GTACCTGAGTGTGCAGGCAGATTCTGCCCTCCAGGGATGTAGGTCGAGGCCGTCCACCCCGGAGGGCCAGCTCTTCCGAG
GCTCCAGCCTGCTTTTCCGCCGGGTGTCATCAGGATCATGCTTCGCCCTGGAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 361 .21 RPM |
| SRP007412_cerebellum | 137 .41 RPM |
| SRP007412_heart | 48 .98 RPM |
| SRP007412_kidney | 123 .74 RPM |
| SRP007412_liver | 52 .08 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000137409 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000003908 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000021976 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000010899 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000003296 | within_species_paralog | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000018115 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000014777 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000001966 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_691 | 75.33 | 57.03 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_3011 | 87.65 | 67.02 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000016557 retrocopies