Parental gene:

PANK3, ENSPTRG00000017509

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:5:169565748..169589806(-)


>ENSPTRG00000017509
ATGAAGATCAAAGATGCCAAGAAACCCTCTTTCCCATGGTTTGGCATGGACATTGGGGGAACTCTAGTAAAGCTCTCGTA
CTTTGAACCTATTGATATCACAGCAGAGGAAGAGCAAGAAGAAGTTGAGAGTTTAAAAAGTATTCGGAAATATTTGACTT
CTAACGTGGCATATGGATCCACCGGCATTCGGGATGTACACCTTGAACTGAAAGATTTAACACTTTTTGGCCGAAGAGGG
AACTTGCACTTTATCAGGTTTCCAACCCAGGACCTGCCTACTTTTATCCAAATGGGAAGAGATAAAAACTTCTCAACATT
GCAGACGGTGCTATGTGCTACAGGAGGTGGTGCTTACAAGTTTGAAAAAGATTTTCGCACAATTGGAAACCTCCACCTGC
ACAAACTGGATGAACTTGACTGCCTTGTAAAGGGCTTGCTGTATATAGACTCTGTCAGTTTCAATGGACAAGCCGAGTGC
TATTATTTTGCTAATGCCTCAGAACCTGAGCGATGCCAAAAGATGCCTTTTAACCTGGATGATCCCTATCCACTGCTTGT
AGTGAACATTGGCTCAGGAGTCAGTATTTTAGCAGTCCATTCCAAAGACAACTATAAACGAGTGACTGGGACAAGCCTTG
GAGGGGGTACCTTTCTGGGTTTATGCAGTTTATTGACTGGCTGTGAAAGTTTTGAAGAGGCTCTTGAAATGGCATCCAAA
GGTGATAGCACACAAGCTGACAAGCTGGTCCGTGATATTTATGGAGGAGATTATGAAAGATTTGGTTTGCCAGGTTGGGC
TGTAGCATCTAGTTTTGGGAATATGATTTATAAGGAGAAGCGAGAATCTGTTAGTAAAGAAGATCTGGCAAGAGCTACTT
TAGTTACTATCACCAATAACATTGGTTCTGTGGCACGAATGTGTGCTGTTAATGAGAAAATAAACAGAGTTGTCTTTGTT
GGAAACTTTTTACGTGTCAATACCCTCTCAATGAAACTTTTGGCATATGCACTGGATTACTGGTCAAAAGGTCAACTAAA
AGCATTGTTTCTAGAACATGAGGGATACTTTGGAGCAGTTGGTGCACTTCTTGGGCTGCCAAATTTCAGCTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 11 .87 RPM
SRP007412_cerebellum 29 .25 RPM
SRP007412_heart 13 .84 RPM
SRP007412_kidney 20 .19 RPM
SRP007412_liver 18 .40 RPM
SRP007412_testis 30 .25 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000011633 ortholog_one2one 4 retrogenes
retro_chof_1188, retro_chof_1391, retro_chof_1837, retro_chof_830,
Callithrix jacchus ENSCJAG00000015550 ortholog_one2many 1 retrogene
retro_cjac_2037,
Homo sapiens ENSG00000120137 ortholog_one2one 1 retrogene
retro_hsap_779,
Gorilla gorilla ENSGGOG00000004947 ortholog_one2one 1 retrogene
retro_ggor_646,
Nomascus leucogenys ENSNLEG00000004896 ortholog_one2one 5 retrogenes
retro_nleu_1430, retro_nleu_144, retro_nleu_2975, retro_nleu_3058, retro_nleu_3099,
Pongo abelii ENSPPYG00000016024 ortholog_one2one 1 retrogene
retro_pabe_2848,
Tursiops truncatus ENSTTRG00000016157 ortholog_one2many 3 retrogenes
retro_ttru_1947, retro_ttru_29, retro_ttru_994,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_608 89.30 100.00
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Download FASTA sequences of all ENSPTRG00000017509 retrocopies