Parental gene: | PANK3, ENSPPYG00000016024 |
| Aliases: | None |
| Description: | pantothenate kinase 3 [Source:HGNC Symbol;Acc:19365] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 5:171199767..171220811(-) |
>ENSPPYG00000016024
ATGAAGATCAAAGATGCCAAGAAACCCTCTTTCCCATGGTTTGGCATGGACATTGGGGGAACTCTAGTAAAGCTCTCGTA
CTTTGAACCTATTGATATTACAGCAGAGGAAGAACAAGAAGAAGTTGAGAGTTTAAAAAGTATTCGGAAATATTTGACTT
CTAACGTGGCATATGGATCCACTGGCATTCGGGATGTACACCTTGAACTGAAAGATTTAACACTTTTTGGCCGAAGAGGG
AACTTGCACTTTATCAGGTTTCCAACCCAGGACCTGCCTACTTTTATCCAAATGGGAAGAGATAAAAACTTTTCAACATT
GCAAACGGTGCTATGTGCTACAGGAGGTGGTGCTTACAAGTTTGAAAAAGATTTTCGCACAATTGGAAACCTCCACCTGC
ACAAACTGGATGAACTTGACTGCCTTGTAAAGGGCTTGCTGTATATAGACTCTGTCAGTTTCAATGGACAAGCCGAGTGC
TATTATTTTGCTAATGCCTCAGAACCTGAGCGATGCCAAAAGATGCCTTTTAACCTGGATGATCCCTATCCACTGCTTGT
AGTGAACATTGGCTCAGGAGTCAGTATTTTAGCAGTCCATTCCAAAGACAACTATAAACGAGTGACTGGGACAAGCCTTG
GAGGGGGTACCTTTCTGGGTTTATGCAGTTTATTGACTGGCTGTGAAAGTTTCGAAGAGGCTCTTGAAATGGCATCCAAA
GGTGATAGCACACAAGCTGACAAGCTGGTCCGTGATATTTATGGAGGAGATTATGAAAGATTTGGTTTGCCAGGTTGGGC
TGTAGCATCTAGTTTTGGGAATATGATTTATAAGGAGAAGCGAGAATCTGTTAGTAAAGAAGATCTGGCAAGAGCTACTT
TAGTTACTATCACCAATAACATTGGTTCTGTGGCACGAATGTGTGCTGTTAATGAGAAGATAAACAGAGTTGTCTTTGTT
GGAAACTTTTTACGTGTCAATACCCTCTCAATGAAACTTTTGGCATATGCACTGGATTACTGGTCAAAAGGTCAACTAAA
AGCATTGTTTCTAGAACATGAGGGATACTTTGGAGCAGTTGGTGCACTTCTTGGGCTGCCAAATTTCAGCTAA
ATGAAGATCAAAGATGCCAAGAAACCCTCTTTCCCATGGTTTGGCATGGACATTGGGGGAACTCTAGTAAAGCTCTCGTA
CTTTGAACCTATTGATATTACAGCAGAGGAAGAACAAGAAGAAGTTGAGAGTTTAAAAAGTATTCGGAAATATTTGACTT
CTAACGTGGCATATGGATCCACTGGCATTCGGGATGTACACCTTGAACTGAAAGATTTAACACTTTTTGGCCGAAGAGGG
AACTTGCACTTTATCAGGTTTCCAACCCAGGACCTGCCTACTTTTATCCAAATGGGAAGAGATAAAAACTTTTCAACATT
GCAAACGGTGCTATGTGCTACAGGAGGTGGTGCTTACAAGTTTGAAAAAGATTTTCGCACAATTGGAAACCTCCACCTGC
ACAAACTGGATGAACTTGACTGCCTTGTAAAGGGCTTGCTGTATATAGACTCTGTCAGTTTCAATGGACAAGCCGAGTGC
TATTATTTTGCTAATGCCTCAGAACCTGAGCGATGCCAAAAGATGCCTTTTAACCTGGATGATCCCTATCCACTGCTTGT
AGTGAACATTGGCTCAGGAGTCAGTATTTTAGCAGTCCATTCCAAAGACAACTATAAACGAGTGACTGGGACAAGCCTTG
GAGGGGGTACCTTTCTGGGTTTATGCAGTTTATTGACTGGCTGTGAAAGTTTCGAAGAGGCTCTTGAAATGGCATCCAAA
GGTGATAGCACACAAGCTGACAAGCTGGTCCGTGATATTTATGGAGGAGATTATGAAAGATTTGGTTTGCCAGGTTGGGC
TGTAGCATCTAGTTTTGGGAATATGATTTATAAGGAGAAGCGAGAATCTGTTAGTAAAGAAGATCTGGCAAGAGCTACTT
TAGTTACTATCACCAATAACATTGGTTCTGTGGCACGAATGTGTGCTGTTAATGAGAAGATAAACAGAGTTGTCTTTGTT
GGAAACTTTTTACGTGTCAATACCCTCTCAATGAAACTTTTGGCATATGCACTGGATTACTGGTCAAAAGGTCAACTAAA
AGCATTGTTTCTAGAACATGAGGGATACTTTGGAGCAGTTGGTGCACTTCTTGGGCTGCCAAATTTCAGCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 5 .58 RPM |
| SRP007412_cerebellum | 7 .42 RPM |
| SRP007412_heart | 2 .32 RPM |
| SRP007412_kidney | 3 .28 RPM |
| SRP007412_liver | 5 .39 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000011633 | ortholog_one2one | 4 retrogenes | |
| Callithrix jacchus | ENSCJAG00000015550 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000120137 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000004947 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000004896 | ortholog_one2one | 5 retrogenes | |
| Pan troglodytes | ENSPTRG00000017509 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000016157 | ortholog_one2many | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_2848 | 91.40 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000016024 retrocopies