Parental gene: | RNF14, ENSPTRG00000017356 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 5:142729034..142750371(+) |
>ENSPTRG00000017356
ATGTCGTCAGAAGATCGAGAAGCTCAGGAGGATGAATTGCTGGCCCTGGCAAGTATTTACGATGGAGATGAATTTAGAAA
AGCAGAGTCTGTCCAAGGTGGAGAAACCAGGATCTATTTGGATTTGCCACAGAATTTCAAGATATTTGTGAGCGGCAATT
CAAATGAGTGTCTCCAGAATAGTGGCTTTGAATACACCATTTGCTTTCTGCCTCCACTTGTGCTGAACTTTGAACTGCCA
CCAGATTATCCATCCTCTTCCCCACCTTCATTCACACTTAGTGGCAAATGGCTGTCACCAACTCAGCTATCTGCTCTATG
CAAGCACTTAGACAACCTATGGGAAGAACACCGTGGCAGCGTGGTCCTGTTTGCCTGGATGCAATTTCTTAAGGAAGAGA
CCCTAGCATACTTGAATATTGTCTCTCCTTTTGAGCTCAAGATTGGTTCTCAGAAAAAAGTGCAGAGAAGGACAGCTCAA
GCTTCTCCCAACACAGAGCTAGATTTTGGAGGAGCTGCTGGATCTGATGTAGACCAAGAGGAAATTGTGGATGAGAGAGC
AGTGCAGGATGTGGAATCACTGTCAAATCTGATCCAGGAAATCTTGGACTTTGATCAAGCTCAGCAGATAAAATGCTTTA
ATAGTAAATTGTTCCTGTGCAATATCTGTTTCTGTGAGAAGCTGGGTAGTGAATGCATGTACTTCTTGGAGTGCAGGCAT
GTGTACTGCAAAGCCTGTTTGAAGGACTACTTTGAAATCCAGATCAGAGATGGCCAGGTTCAATGCCTCAACTGCCCAGA
ACCAAAGTGCCCTTCGGTGGCCACTCCTGGTCAGGTCAAAGAGTTAGTGGAAGCAGAGTTATTTGCCCGTTATGACCGCC
TTCTCCTCCAGTCCTCCTTGGACCTGATGGCAGATGTGGTGTACTGCCCCCGGCCGTGCTGCCAGCTGCCTGTGATGCAG
GAACCTGGCTGCACCATGGGTATCTGCTCCAGCTGCAATTTTGCCTTCTGTACTTTGTGCAGGTTGACCTACCATGGGGT
CTCTCCATGTAAGGTGACTGCAGAGAAATTAATGGACTTACGAAATGAATACCTGCAAGCAGATGAGGCTAATAAAAGAC
TTTTGGATCAAAGGTATGGTAAGAGAGTGATTCAGAAGGCACTGGAAGAGATGGAAAGTAAGGAGTGGCTAGAGAAGAAC
TCAAAGAGCTGCCCATGTTGTGGAACTCCCATAGAGAAATTAGATGGATGTAACAAGATGACATGTACTGGCTGTATGCA
ATATTTCTGTTGGATTTGCATGGGTTCTCTCTCTAGAGCAAACCCTTACAAACATTTCAATGACCCTGGTTCACCATGTT
TTAACCGGCTGTTTTATGCTGTGGATGTTGACGACGATATTTGGGAAGATGAGGTAGAAGACTAG
ATGTCGTCAGAAGATCGAGAAGCTCAGGAGGATGAATTGCTGGCCCTGGCAAGTATTTACGATGGAGATGAATTTAGAAA
AGCAGAGTCTGTCCAAGGTGGAGAAACCAGGATCTATTTGGATTTGCCACAGAATTTCAAGATATTTGTGAGCGGCAATT
CAAATGAGTGTCTCCAGAATAGTGGCTTTGAATACACCATTTGCTTTCTGCCTCCACTTGTGCTGAACTTTGAACTGCCA
CCAGATTATCCATCCTCTTCCCCACCTTCATTCACACTTAGTGGCAAATGGCTGTCACCAACTCAGCTATCTGCTCTATG
CAAGCACTTAGACAACCTATGGGAAGAACACCGTGGCAGCGTGGTCCTGTTTGCCTGGATGCAATTTCTTAAGGAAGAGA
CCCTAGCATACTTGAATATTGTCTCTCCTTTTGAGCTCAAGATTGGTTCTCAGAAAAAAGTGCAGAGAAGGACAGCTCAA
GCTTCTCCCAACACAGAGCTAGATTTTGGAGGAGCTGCTGGATCTGATGTAGACCAAGAGGAAATTGTGGATGAGAGAGC
AGTGCAGGATGTGGAATCACTGTCAAATCTGATCCAGGAAATCTTGGACTTTGATCAAGCTCAGCAGATAAAATGCTTTA
ATAGTAAATTGTTCCTGTGCAATATCTGTTTCTGTGAGAAGCTGGGTAGTGAATGCATGTACTTCTTGGAGTGCAGGCAT
GTGTACTGCAAAGCCTGTTTGAAGGACTACTTTGAAATCCAGATCAGAGATGGCCAGGTTCAATGCCTCAACTGCCCAGA
ACCAAAGTGCCCTTCGGTGGCCACTCCTGGTCAGGTCAAAGAGTTAGTGGAAGCAGAGTTATTTGCCCGTTATGACCGCC
TTCTCCTCCAGTCCTCCTTGGACCTGATGGCAGATGTGGTGTACTGCCCCCGGCCGTGCTGCCAGCTGCCTGTGATGCAG
GAACCTGGCTGCACCATGGGTATCTGCTCCAGCTGCAATTTTGCCTTCTGTACTTTGTGCAGGTTGACCTACCATGGGGT
CTCTCCATGTAAGGTGACTGCAGAGAAATTAATGGACTTACGAAATGAATACCTGCAAGCAGATGAGGCTAATAAAAGAC
TTTTGGATCAAAGGTATGGTAAGAGAGTGATTCAGAAGGCACTGGAAGAGATGGAAAGTAAGGAGTGGCTAGAGAAGAAC
TCAAAGAGCTGCCCATGTTGTGGAACTCCCATAGAGAAATTAGATGGATGTAACAAGATGACATGTACTGGCTGTATGCA
ATATTTCTGTTGGATTTGCATGGGTTCTCTCTCTAGAGCAAACCCTTACAAACATTTCAATGACCCTGGTTCACCATGTT
TTAACCGGCTGTTTTATGCTGTGGATGTTGACGACGATATTTGGGAAGATGAGGTAGAAGACTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 38 .91 RPM |
| SRP007412_cerebellum | 45 .74 RPM |
| SRP007412_heart | 43 .11 RPM |
| SRP007412_kidney | 55 .00 RPM |
| SRP007412_liver | 23 .04 RPM |
| SRP007412_testis | 74 .72 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000007803 | possible_ortholog | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000024423 | possible_ortholog | 1 retrogene | |
| Homo sapiens | ENSG00000013561 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000008542 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000009768 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000015894 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_2571 | 85.33 | 77.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_2643 | 72.59 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000017356 retrocopies