Parental gene: | RNF14, ENSPPYG00000015894 |
| Aliases: | None |
| Description: | E3 ubiquitin-protein ligase RNF14 [Source:RefSeq peptide;Acc:NP_001125890] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 5:143506477..143528217(+) |
>ENSPPYG00000015894
ATGTCGTCAGAAGATCGAGAAGCTCAGGAGGATGAATTGCTGGCCCTGGCAAGTATTTACGATGGAGATGAATTTAGAAA
AGCAGAGTCTGTCCAAGGTGGAGAAACCAGGATCTATTTGGATTTGCCACAGAATTTCAAGATATTTGTGAGCGGCAATT
CAAATGAGTGTCTCCAGAATAGTGGCTTTGAATACACCATTTGCTTTCTGCCTCCACTTGTGCTGAACTTTGAACTGCCA
CCAGATTATCCATCCTCTTCCCCACCTTCATTCACACTTAGTGGCAAATGGCTGTCACCAACTCAGCTATCTGCTCTATG
CAAGCACTTAGACAACCTATGGGAAGAACACCGTGGCAGCGTGGTCCTGTTTGCCTGGATGCAATTTCTTAAGGAAGAGA
CCCTAGCATACTTGAATATTGTCTCTCCTTTTGAGCTCAAGATTGGTTCTCAGAAAAAAGTGCAGAGAAGGACAGCTCAA
GCTTCTCCCAACACAGAGCTAGATTTTGGAGGAGCTGCTGGATCTAATGTAGACCAAGAGGAAATTGTGGATGAGAGAGC
TGTGCAGGATGTGGAATCACTGTCAAATCTGATCCAGGAAATCTTGGACTTTGATCAAGCTCAGCAGATAAAATGCTTTA
ATAGTAAATTGTTCCTGTGCAATATCTGTTTCTGTGAGAAGCTGGGTAGTGAATGCATGTACTTCTTGGAGTGCAGGCAT
GTATACTGCAAAGCCTGTCTGAAGGACTACTTTGAAATCCAGATCAGAGATGGCCAGGTTCAATGCCTCAACTGCCCAGA
ACCAAAGTGCCCTTCGGTGGCCACTCCTGGTCAGGTCAAAGAGTTAGTGGAAGCAGAGTTATTTGCCCGTTATGACCGCC
TTCTCCTCCAGTCCTCCTTGGACCTGATGGCAGATGTGGTGTACTGCCCCCGGCCGTGCTGCCAGCTGCCTGTGATGCAG
GAGCCTGGCTGCACCATGGGTATCTGCTCTAGCTGCAATTTTGCCTTCTGTACTTTGTGCAGGTTGACCTACCATGGGGT
CTCTCCATGTAAGGTGACTGCAGAAAAATTAATGGACTTACGAAATGAATACCTGCAAGCAGATGAGGCTAATAAAAGAC
TTTTGGATCAAAGGTATGGTAAGAGAGTGATTCAGAAGGCACTGGAAGAGATGGAAAGTAAGGAGTGGCTAGAGAAGAAC
TCAAAGAGCTGCCCATGTTGTGGAACTCCCATAGAGAAATTAGATGGATGTAACAAGATGACATGTACTGGCTGTATGCA
ATATTTCTGTTGGATTTGCATGGGTTCTCTCTCTAGGGCAAACCCTTACAAACATTTCAATGATCCTGGTTCACCATGTT
TTAACCGGCTGTTTTATGCTGTGGATGTTGATGACGATATTTGGGAAGATGAGGTTGAAGACTAG
ATGTCGTCAGAAGATCGAGAAGCTCAGGAGGATGAATTGCTGGCCCTGGCAAGTATTTACGATGGAGATGAATTTAGAAA
AGCAGAGTCTGTCCAAGGTGGAGAAACCAGGATCTATTTGGATTTGCCACAGAATTTCAAGATATTTGTGAGCGGCAATT
CAAATGAGTGTCTCCAGAATAGTGGCTTTGAATACACCATTTGCTTTCTGCCTCCACTTGTGCTGAACTTTGAACTGCCA
CCAGATTATCCATCCTCTTCCCCACCTTCATTCACACTTAGTGGCAAATGGCTGTCACCAACTCAGCTATCTGCTCTATG
CAAGCACTTAGACAACCTATGGGAAGAACACCGTGGCAGCGTGGTCCTGTTTGCCTGGATGCAATTTCTTAAGGAAGAGA
CCCTAGCATACTTGAATATTGTCTCTCCTTTTGAGCTCAAGATTGGTTCTCAGAAAAAAGTGCAGAGAAGGACAGCTCAA
GCTTCTCCCAACACAGAGCTAGATTTTGGAGGAGCTGCTGGATCTAATGTAGACCAAGAGGAAATTGTGGATGAGAGAGC
TGTGCAGGATGTGGAATCACTGTCAAATCTGATCCAGGAAATCTTGGACTTTGATCAAGCTCAGCAGATAAAATGCTTTA
ATAGTAAATTGTTCCTGTGCAATATCTGTTTCTGTGAGAAGCTGGGTAGTGAATGCATGTACTTCTTGGAGTGCAGGCAT
GTATACTGCAAAGCCTGTCTGAAGGACTACTTTGAAATCCAGATCAGAGATGGCCAGGTTCAATGCCTCAACTGCCCAGA
ACCAAAGTGCCCTTCGGTGGCCACTCCTGGTCAGGTCAAAGAGTTAGTGGAAGCAGAGTTATTTGCCCGTTATGACCGCC
TTCTCCTCCAGTCCTCCTTGGACCTGATGGCAGATGTGGTGTACTGCCCCCGGCCGTGCTGCCAGCTGCCTGTGATGCAG
GAGCCTGGCTGCACCATGGGTATCTGCTCTAGCTGCAATTTTGCCTTCTGTACTTTGTGCAGGTTGACCTACCATGGGGT
CTCTCCATGTAAGGTGACTGCAGAAAAATTAATGGACTTACGAAATGAATACCTGCAAGCAGATGAGGCTAATAAAAGAC
TTTTGGATCAAAGGTATGGTAAGAGAGTGATTCAGAAGGCACTGGAAGAGATGGAAAGTAAGGAGTGGCTAGAGAAGAAC
TCAAAGAGCTGCCCATGTTGTGGAACTCCCATAGAGAAATTAGATGGATGTAACAAGATGACATGTACTGGCTGTATGCA
ATATTTCTGTTGGATTTGCATGGGTTCTCTCTCTAGGGCAAACCCTTACAAACATTTCAATGATCCTGGTTCACCATGTT
TTAACCGGCTGTTTTATGCTGTGGATGTTGATGACGATATTTGGGAAGATGAGGTTGAAGACTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 46 .00 RPM |
| SRP007412_cerebellum | 43 .78 RPM |
| SRP007412_heart | 35 .64 RPM |
| SRP007412_kidney | 41 .20 RPM |
| SRP007412_liver | 29 .84 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000007803 | possible_ortholog | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000024423 | possible_ortholog | 1 retrogene | |
| Homo sapiens | ENSG00000013561 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000008542 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000009768 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000017356 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_3095 | 89.31 | 61.18 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_3115 | 77.75 | 71.52 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000015894 retrocopies