Parental gene:

FRG1, ENSPTRG00000016671

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:GL389919.1:47310..70073(+)


>ENSPTRG00000016671
ATGGCCGAGTACTCCTATGTGAAGTCTACCAAGCTCGTGCTCAAGGGAACCAAGACGAAGAGTAAGAAGAAAAAGAGCAA
AGATAAGAAAAGAAAAAGAGAAGAAGATGAAGAAACCCAGCTTGATATTGTTGGAATCTGGTGGACAGTAACAAACTTTG
GTGAAATTTCAGGAACCATAGCCATTGAAATGGATAAGGGAACCTATATACATGCACTCGACAATGGTCTTTTTACCCTG
GGAGCTCCACACAAAGAAGTTGATGAGGGCCCTAGTCCTCCAGAGCAGTTTACGGCTGTCAAATTATCTGATTCCAGAAT
CGCCCTGAAGTCTGGCTACGGAAAATATCTTGGTATAAATTCAGATGGACTTGTTGTTGGGCGTTCAGATGCAATTGGAC
CAAGAGAACAATGGGAACCAGTCTTTCAAAATGGGAAAATGGCTTTGTTGGCCTCAAATAGCTGCTTTATTAGATGCAAT
GAAGCAGGGGACATAGAAGCAAAAAGTAAAACAGCAGGAGAAGAAGAAATGATCAAGATTAGATCCTGTGCTGAAAGAGA
AACCAAGAAAAAAGATGACATTCCAGAAGAAGACAAAGGAAATGTAAAACAATGTGAAATCAATTATGTAAAGAAATTTC
AGAGCTTCCAAGACCACAAACTTAAAATAAGTAAAGAAGACAGTAAAATTCTTAAAAAGGCTCGGAAAGATGGATTTTTG
CATGAGACGCTTCTGGACAGGAGAGCCAAATTGAAAGCCGACAGATACTGCAAGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 10 .33 RPM
SRP007412_cerebellum 16 .42 RPM
SRP007412_heart 11 .57 RPM
SRP007412_kidney 14 .91 RPM
SRP007412_liver 14 .47 RPM
SRP007412_testis 20 .97 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000022277 ortholog_one2one 7 retrogenes
retro_cpor_1349, retro_cpor_1350, retro_cpor_1359, retro_cpor_1361, retro_cpor_1362, retro_cpor_1363, retro_cpor_864,
Felis catus ENSFCAG00000025737 possible_ortholog 1 retrogene
retro_fcat_464,
Otolemur garnettii ENSOGAG00000005749 ortholog_one2one 2 retrogenes
retro_ogar_1523, retro_ogar_2535,
Rattus norvegicus ENSRNOG00000009846 ortholog_one2many 1 retrogene
retro_rnor_88,
Tupaia belangeri ENSTBEG00000014491 ortholog_one2many 2 retrogenes
retro_tbel_1202, retro_tbel_3435,
Tarsius syrichta ENSTSYG00000010985 possible_ortholog 2 retrogenes
retro_tsyr_1347, retro_tsyr_1778,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2930 94.89 53.10
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Download FASTA sequences of all ENSPTRG00000016671 retrocopies