Parental gene:

CCDC12, ENSPTRG00000014862

Aliases:None
Description:coiled-coil domain containing 12 [Source:HGNC Symbol;Acc:28332]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:3:47621558..47676894(-)


>ENSPTRG00000014862
ATGCAAGACGGGAGAAAAGGAGGGGCGTACGCGGGCAAGATGGAGGCGACTACGGCTGGTGTGGGCCGGCTAGAGGAAGA
GGCGTTGCGGCGAAAGGAACGGCTGAAGGCCCTACGGGAGAAAACCGGGCGCAAGGACAAGGAAGATGGGGAGCCAAAGA
CCAAGCATCTCAGAGAAGAGGAGGAAGAAGGCGAGAAGCACAGGGAACTTAGGCTGCGGAACTATGTCCCGGAGGATGAG
GACCTGAAGAAGAGGAGGGTGCCCCAGGCCAAACCGGTTGCAGTGGAGGAGAAGGTGAAGGAGCAGCTGGAGGCCGCCAA
GCCCGAGCCCGTCATCGAGGAGGTGGACCTGGCCAACCTTGCTCCTCGGAAGCCTGACTGGGACCTCAAGAGAGATGTGG
CCAAGAAGCTGGAGAAACTAAAAAAGCGGACTCAGAGGGCCATTGCCGAGCTGATCCGTGAAAGGCTGAAAGGCCAGGAA
GACAGCCTAGCCTCTGCAGTGGATGCTGCCACCGAACAAAAGACCTGTGACTCCGACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 23 .83 RPM
SRP007412_cerebellum 27 .96 RPM
SRP007412_heart 15 .65 RPM
SRP007412_kidney 30 .57 RPM
SRP007412_liver 28 .87 RPM
SRP007412_testis 11 .38 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000002280 ortholog_one2one 3 retrogenes
retro_cjac_1212, retro_cjac_2317, retro_cjac_3225,
Dipodomys ordii ENSDORG00000016567 ortholog_one2one 1 retrogene
retro_dord_303,
Echinops telfairi ENSETEG00000000030 ortholog_one2one 2 retrogenes
retro_etel_1445, retro_etel_2038,
Homo sapiens ENSG00000160799 ortholog_one2one 1 retrogene
retro_hsap_2257,
Macaca mulatta ENSMMUG00000019810 ortholog_one2one 1 retrogene
retro_mmul_1025,
Mus musculus ENSMUSG00000019659 ortholog_one2one 1 retrogene
retro_mmus_1275,
Nomascus leucogenys ENSNLEG00000006219 ortholog_one2one 1 retrogene
retro_nleu_1282,
Ochotona princeps ENSOPRG00000005086 ortholog_one2one 1 retrogene
retro_opri_746,
Pongo abelii ENSPPYG00000013924 ortholog_one2one 2 retrogenes
retro_pabe_1957, retro_pabe_2033,
Sarcophilus harrisii ENSSHAG00000003265 ortholog_one2one 1 retrogene
retro_shar_251,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1597 69.80 82.12
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPTRG00000014862 retrocopies