Parental gene: | DSCR3, ENSPTRG00000013900 |
| Aliases: | None |
| Description: | Down syndrome critical region gene 3 [Source:HGNC Symbol;Acc:3044] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 21:23317881..23362527(-) |
>ENSPTRG00000013900
ATGGGGACCGCCCTGGACATCAAGATTAAAAGAGCGAATAAAGTTTATCACGCCGGGGAAGTGCTCTCTGGCGTGGTGGT
CATATCGAGTAAGGATTCAGTCCAACACCAGGGAGTGTCTTTGACCATGGAAGGAACTGTAAACCTCCAGCTCAGTGCCA
AAAGTGTGGGTGTGTTTGAAGCTTTTTATAATTCTGTTAAGCCTATCCAGATTATCAACAGCACCATAGAAATGGTGAAG
CCAGGGAAATTTCCCAGCGGCAAAACAGAAATCCCTTTTGAATTTCCTCTGCACGTGAAGGGTAACAAAGTTCTGTATGA
GACGTATCATGGCGTGTTTGTCAACATTCAGCCTCAGAAGGGGAAGTTTACTCCCAGTCCCGTGGACTTCACGATTACAC
CTGAAACCTTACAGAACGTCAAAGAGAGAGCTTTGCTTCCCAAGTTTCTCCTTCGAGGACATCTCAACTCAACAAACTGT
GTCATCACACAGCCGCTAACGGGAGAGCTGGTGGTGGAGAGCTCGGAAGCCGCCATCAGAAGCGTGGAGCTGCAGCTGGT
GCGCGTGGAGACATGCGGGTGTGCAGAAGGCTACGCCCGCGACGCCACGGAGATTCAGAACATTCAGATCGCCGACGGGG
ATGTGTGCAGGGGCCTCTCTGTCCCCATCTACATGGTCTTCCCTAGGCTGTTCACCTGCCCTACACTGGAGACCACCAAC
TTCAAAGTGGAATTTGAGGTTAACATCGTGGTGCTTCTTCACCCTGACCACCTCATCACGGAGAACTTCCCGCTGAAGCT
CTGCAGGATATAG
ATGGGGACCGCCCTGGACATCAAGATTAAAAGAGCGAATAAAGTTTATCACGCCGGGGAAGTGCTCTCTGGCGTGGTGGT
CATATCGAGTAAGGATTCAGTCCAACACCAGGGAGTGTCTTTGACCATGGAAGGAACTGTAAACCTCCAGCTCAGTGCCA
AAAGTGTGGGTGTGTTTGAAGCTTTTTATAATTCTGTTAAGCCTATCCAGATTATCAACAGCACCATAGAAATGGTGAAG
CCAGGGAAATTTCCCAGCGGCAAAACAGAAATCCCTTTTGAATTTCCTCTGCACGTGAAGGGTAACAAAGTTCTGTATGA
GACGTATCATGGCGTGTTTGTCAACATTCAGCCTCAGAAGGGGAAGTTTACTCCCAGTCCCGTGGACTTCACGATTACAC
CTGAAACCTTACAGAACGTCAAAGAGAGAGCTTTGCTTCCCAAGTTTCTCCTTCGAGGACATCTCAACTCAACAAACTGT
GTCATCACACAGCCGCTAACGGGAGAGCTGGTGGTGGAGAGCTCGGAAGCCGCCATCAGAAGCGTGGAGCTGCAGCTGGT
GCGCGTGGAGACATGCGGGTGTGCAGAAGGCTACGCCCGCGACGCCACGGAGATTCAGAACATTCAGATCGCCGACGGGG
ATGTGTGCAGGGGCCTCTCTGTCCCCATCTACATGGTCTTCCCTAGGCTGTTCACCTGCCCTACACTGGAGACCACCAAC
TTCAAAGTGGAATTTGAGGTTAACATCGTGGTGCTTCTTCACCCTGACCACCTCATCACGGAGAACTTCCCGCTGAAGCT
CTGCAGGATATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 11 .62 RPM |
| SRP007412_cerebellum | 10 .68 RPM |
| SRP007412_heart | 12 .65 RPM |
| SRP007412_kidney | 32 .14 RPM |
| SRP007412_liver | 19 .80 RPM |
| SRP007412_testis | 8 .22 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000002626 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000007920 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000004717 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000001681 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_2418 | 98.09 | 58.15 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000013900 retrocopies