Parental gene:

PSMD14, ENSPTRG00000012575

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:2B:165600356..165702728(+)


>ENSPTRG00000012575
ATGGACAGACTTCTTAGACTTGGAGGAGGTATGCCTGGACTGGGCCAGGGGCCACCTACAGATGCTCCTGCAGTGGACAC
AGCAGAACAAGTCTATATCTCTTCCCTGGCACTGTTAAAAATGTTAAAACATGGCCGTGCTGGAGTTCCAATGGAAGTTA
TGGGTTTGATGCTTGGAGAATTTGTTGATGATTATACCGTCAGAGTGATTGATGTGTTTGCTATGCCACAGTCAGGAACA
GGTGTCAGTGTGGAGGCAGTTGATCCAGTGTTCCAAGCTAAAATGTTGGATATGTTGAAGCAGACAGGAAGGCCGGAGAT
GGTTGTTGGTTGGTATCACAGTCACCCTGGCTTTGGTTGTTGGCTTTCTGGTGTGGATATCAACACTCAGCAGAGCTTTG
AAGCCTTGTCGGAGAGAGCTGTGGCAGTGGTTGTGGATCCCATTCAGAGTGTAAAAGGAAAGGTTGTTATTGATGCCTTC
AGATTGATCAATGCTAATATGATGGTCTTAGGACATGAACCAAGACAAACAACTTCGAATCTGGGTCACTTAAACAAGCC
ATCTATCCAGGCATTAATTCATGGACTAAACAGACATTATTACTCCATTACTATTAACTATCGGAAAAATGAACTGGAAC
AGAAGATGTTGCTAAATTTGCATAAGAAGAGTTGGATGGAAGGTTTGACACTTCAGGACTACAGTGAACATTGTAAACAC
AATGAATCAGTGGTAAAAGAGATGTTGGAATTAGCCAAGAATTACAATAAGGCTGTAGAAGAAGAAGATAAGATGACACC
TGAACAGCTGGCAATAAAGAATGTTGGCAAGCAGGACCCCAAACGTCATTTGGAGGAACATGTGGATGTACTTATGACCT
CAAATATTGTCCAGTGTTTAGCAGCTATGTTGGATACTGTCGTATTTAAATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 33 .09 RPM
SRP007412_cerebellum 40 .29 RPM
SRP007412_heart 40 .16 RPM
SRP007412_kidney 38 .99 RPM
SRP007412_liver 52 .83 RPM
SRP007412_testis 87 .89 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000002556 ortholog_one2one 1 retrogene
retro_chof_2387,
Callithrix jacchus ENSCJAG00000005572 ortholog_one2one 1 retrogene
retro_cjac_1434,
Gorilla gorilla ENSGGOG00000015747 ortholog_one2one 1 retrogene
retro_ggor_1710,
Mus musculus ENSMUSG00000026914 ortholog_one2one 1 retrogene
retro_mmus_701,
Otolemur garnettii ENSOGAG00000004933 ortholog_one2one 2 retrogenes
retro_ogar_2955, retro_ogar_3213,
Pongo abelii ENSPPYG00000012881 ortholog_one2one 1 retrogene
retro_pabe_2100,
Rattus norvegicus ENSRNOG00000004911 ortholog_one2one 1 retrogene
retro_rnor_1271,
Tupaia belangeri ENSTBEG00000014118 ortholog_one2one 1 retrogene
retro_tbel_3917,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1636 71.79 62.58
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Download FASTA sequences of all ENSPTRG00000012575 retrocopies